Co-expression analysis

Gene ID	Zm.6522.2.A1_a_at
Gene name	mpv17 / PMP22 family protein
Homology with Arabidopsis	Similar to At1g52870: peroxisomal membrane protein-related (HF=2e-4)
Module size	6 genes
NF	0.27
%ile	23.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.96	Zm.6522.2.A1_a_at	AY108423.1	mpv17 / PMP22 family protein	-	2e-4	At1g52870	peroxisomal membrane protein-related	O.I.	H.G.	S.X.	Please select
0.63	81.1	0.96	Zm.12365.1.S1_at	AY106477.1	hypothetical protein LOC100193020	-	6e-1	At1g69680	-	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.6521.1.A1_at	AW067094	protein binding protein	-	7e-5	At1g68820	membrane protein, putative	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.97	Zm.4339.1.A1_at	AI711931	-	-	1e+0	At1g47410	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.98	Zm.13619.1.A1_at	CF630917	hypothetical protein LOC100192497 /// serine/threonine-protein kinase SAPK2 /// serine/threonine-protein kinase SAPK2	-	1e-30	At4g33950	OST1 (OPEN STOMATA 1)	O.I.	H.G.	S.X.	Please select
0.08	3.4	0.96	Zm.7276.1.S1_at	BI674107	FLU	-	1e-2	At3g14110	FLU (FLUORESCENT IN BLUE LIGHT)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.8	98.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.7	98.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.6	98.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.4	98.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.2	98.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.1	98.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.9	98.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM206332	Lower pulvinus 15 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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