| Gene ID | Zm.6521.1.A1_at |
| Gene name | protein binding protein |
| Homology with Arabidopsis | Similar to At1g68820: membrane protein, putative (HF=7e-5) |
| Module size | 6 genes |
| NF | 0.49 |
| %ile | 63.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 85.8 | 0.97 | Zm.6521.1.A1_at | AW067094 | protein binding protein | - | 7e-5 | At1g68820 | membrane protein, putative | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.96 | Zm.832.1.S1_at | AY107728.1 | - | - | 1e+0 | At1g54140 | TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT) | O.I. | H.G. | S.X. | |
| 0.60 | 77.8 | 0.97 | Zm.6522.2.A1_a_at | AY108423.1 | mpv17 / PMP22 family protein | - | 2e-4 | At1g52870 | peroxisomal membrane protein-related | O.I. | H.G. | S.X. | |
| 0.43 | 52.8 | 0.97 | Zm.12365.1.S1_at | AY106477.1 | hypothetical protein LOC100193020 | - | 6e-1 | At1g69680 | - | O.I. | H.G. | S.X. | |
| 0.36 | 41.3 | 0.96 | Zm.16508.3.A1_x_at | AI739900 | ribosomal protein L39 | - | 4e-9 | At3g02190 | 60S ribosomal protein L39 (RPL39B) | O.I. | H.G. | S.X. | |
| 0.32 | 33.4 | 0.96 | Zm.4339.1.A1_at | AI711931 | - | - | 1e+0 | At1g47410 | unknown protein | O.I. | H.G. | S.X. |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB | 0.55 | 71.6 | 0.95 | Zm.2106.1.S1_at | CK786800 | hypothetical protein LOC100275326 | - | 2e-2 | At3g05570 | unknown protein | O.I. | H.G. | S.X. | 0.36 | 41.3 | 0.94 | Zm.16510.1.A1_at | CK347176 | - | - | 8e-10 | At1g77380 | AAP3 | O.I. | H.G. | S.X. | 0.36 | 41.3 | 0.95 | ZmAffx.453.1.S1_at | AI677167 | - | - | 1e-2 | At1g71350 | eukaryotic translation initiation factor SUI1 family protein | O.I. | H.G. | S.X. | 0.31 | 31.6 | 0.95 | Zm.17270.1.S1_x_at | AF371274.1 | zein-alpha precursor | - | 5e-1 | At1g06070 | bZIP transcription factor, putative (bZIP69) | O.I. | H.G. | S.X. | 0.30 | 29.8 | 0.93 | Zm.6532.8.A1_at | AW330982 | photosystem I reaction center subunit IV A | - | 1e-3 | At2g20260 | PSAE-2 (photosystem I subunit E-2) | O.I. | H.G. | S.X. | 0.27 | 24.6 | 0.95 | Zm.4315.1.A1_at | AI855026 | IDP665 protein /// hypothetical protein LOC100192715 | - | 1e-1 | At5g07600 | oleosin / glycine-rich protein | O.I. | H.G. | S.X. | 0.27 | 24.6 | 0.96 | Zm.3156.1.A1_at | CA404376 | hypothetical protein LOC100272402 | - | 5e-52 | At3g62120 | tRNA synthetase class II (G, H, P and S) family protein | O.I. | H.G. | S.X. | 0.24 | 19.8 | 0.95 | Zm.8968.1.S1_at | CA404069 | Hypothetical protein LOC100191639 | - | 4e-2 | At1g28140 | unknown protein | O.I. | H.G. | S.X. | 0.21 | 15.5 | 0.95 | Zm.12295.2.S1_a_at | CD441109 | stress responsive protein | - | 2e-2 | At2g39050 | hydroxyproline-rich glycoprotein family protein | O.I. | H.G. | S.X. | 0.21 | 15.5 | 0.97 | Zm.13619.1.A1_at | CF630917 | hypothetical protein LOC100192497 /// serine/threonine-protein kinase SAPK2 /// serine/threonine-protein kinase SAPK2 | - | 1e-30 | At4g33950 | OST1 (OPEN STOMATA 1) | O.I. | H.G. | S.X. |
|---|
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 6.1 | 97.4 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.1 | 96.8 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.8 | 96.6 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.6 | 96.4 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.5 | 96.3 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.9 | 95.7 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.8 | 95.5 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.1 | 94.3 | GSM320467 | protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.1 | 94.3 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.9 | 93.8 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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