Co-expression analysis

Gene ID Zm.6435.1.A1_at
Gene name hypothetical protein LOC100217154
Homology with ArabidopsisSimilar to At2g22370: unknown protein (HF=1e-5)
Module size 17 genes
NF 0.46
%ile 56.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.20.99Zm.6435.1.A1_atBM078602hypothetical protein LOC100217154-1e-5At2g22370unknown proteinO.I.H.G.S.X.
0.6785.80.99Zm.327.1.S1_atAB042270.1histidine kinase 1-3e-14At2g01830WOL (WOODEN LEG)O.I.H.G.S.X.
0.6381.10.99Zm.13228.1.S1_atCA452580LHT1-5e+0At4g17585unknown proteinO.I.H.G.S.X.
0.5875.10.99ZmAffx.1051.1.S1_atAI881809hypothetical protein LOC100272557-2e-1At3g01790ribosomal protein L13 family proteinO.I.H.G.S.X.
0.5674.40.99Zm.15242.1.A1_atBM340075--1e+1At3g16712unknown proteinO.I.H.G.S.X.
0.5065.70.99Zm.8311.2.A1_a_atBM073622--4e+0At4g23090unknown proteinO.I.H.G.S.X.
0.4759.91.00ZmAffx.89.1.A1_atAI665353hypothetical protein LOC100277768-1e+1At5g20560beta-1,3-glucanase, putativeO.I.H.G.S.X.
0.4556.41.00Zm.2805.1.A1_atAW352682hypothetical protein LOC100274443-5e+0At4g13266unknown proteinO.I.H.G.S.X.
0.4556.41.00Zm.4171.1.A1_atBG841769isoamyl acetate-hydrolyzing esterase-3e+0At1g691902-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase/ dihydropteroate synthaseO.I.H.G.S.X.
0.4455.70.99Zm.6275.1.S1_a_atAF540907.1benzoxazin6-7e-1At1g066402-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.4352.80.99Zm.6650.1.A1_atBM336595fiber protein Fb2-3e+0At5g35695unknown proteinO.I.H.G.S.X.
0.4048.50.99Zm.9940.1.A1_atBM339055--3e-2At5g26860LON1 (LON PROTEASE 1)O.I.H.G.S.X.
0.4048.50.99Zm.16320.1.S1_atCO526259hypothetical protein LOC100193231-3e-6At3g19910zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3844.20.99Zm.7054.1.S1_atBM331766actin-depolymerizing factor 6-6e-4At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)O.I.H.G.S.X.
0.3742.30.99Zm.2763.1.S1_atAW067129hypothetical protein LOC100191545-9e-7At1g19710glycosyl transferase family 1 proteinO.I.H.G.S.X.
0.3336.01.00Zm.5813.1.A1_atCF056763hypothetical protein LOC100191474-8e-32At5g55310TOP1BETA (DNA TOPOISOMERASE 1 BETA)O.I.H.G.S.X.
0.1912.81.00Zm.1368.1.A1_atCA399867calcineurin B-like protein 3-3e-40At5g55990CBL2 (CALCINEURIN B-LIKE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.998.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.398.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320446protocol: mRNA - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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