Co-expression analysis

Gene ID	Zm.6328.1.A1_at
Gene name	hypothetical protein LOC100279888
Homology with Arabidopsis	Similar to At4g38060: unknown protein (HF=3e+0)
Module size	6 genes
NF	0.62
%ile	82.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.98	Zm.6328.1.A1_at	AY104064.1	hypothetical protein LOC100279888	-	3e+0	At4g38060	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.5072.1.A1_at	BM078487	hypothetical protein LOC100191823	-	3e-18	At1g72090	radical SAM domain-containing protein / TRAM domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.6905.4.S1_at	AI881845	Histone H1-like protein	-	2e-1	At1g07980	NF-YC10 (NUCLEAR FACTOR Y, SUBUNIT C10)	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.98	Zm.6161.1.A1_at	AW091191	hypothetical protein LOC100193997	-	2e-1	At1g78150	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.97	Zm.5169.1.A1_at	AY104222.1	Fructokinase 1	-	7e-4	At1g06020	pfkB-type carbohydrate kinase family protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.98	Zm.14596.1.S1_at	CD441249	QM protein	-	6e-47	At1g14320	SAC52 (SUPPRESSOR OF ACAULIS 52)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.0	98.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.8	97.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.6	97.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5	97.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.8	93.5	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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