Co-expression analysis

Gene ID	Zm.6324.1.A1_at
Gene name	microtubule-associated protein RP/EB family member 3
Homology with Arabidopsis	Similar to At5g67270: ATEB1C (microtubule end binding protein 1) (HF=1e-14)
Module size	6 genes
NF	0.79
%ile	97.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	94.0	0.89	Zm.6324.1.A1_at	AI586906	microtubule-associated protein RP/EB family member 3	-	1e-14	At5g67270	ATEB1C (microtubule end binding protein 1)	O.I.	H.G.	S.X.	Please select
0.91	99.0	0.93	Zm.5463.1.A1_at	AY104268.1	prolyl-tRNA synthetase	-	4e-80	At5g52520	OVA6 (OVULE ABORTION 6)	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.92	Zm.8882.1.S1_at	BG320046	-	-	1e+1	At1g36732	CPuORF19 (Conserved peptide upstream open reading frame 19)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.93	Zm.9182.1.A1_s_at	BM267124	hypothetical protein LOC100278830	-	1e+0	At2g05803	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.94	Zm.5476.2.S1_at	CF016143	IQ calmodulin-binding motif family protein	-	2e-1	At1g29060	-	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.92	Zm.17980.1.A1_at	CK828030	-	-	7e-1	At1g19010	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.4	98.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.7	97.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.1	97.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.5	97.1	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.2	96.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1	96.8	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.0	96.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.9	96.7	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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