Co-expression analysis

Gene ID Zm.6315.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g44830: AP2 domain-containing transcription factor TINY, putative (HF=2e-1)
Module size 13 genes
NF 0.60
%ile 81.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.80.92Zm.6315.1.A1_atAI691364--2e-1At1g44830AP2 domain-containing transcription factor TINY, putativeO.I.H.G.S.X.
0.8294.60.95Zm.18426.1.A1_atCO529693hypothetical protein LOC100274338-5e-8At1g06890transporter-relatedO.I.H.G.S.X.
0.7288.60.97Zm.10751.1.A1_atBQ539382--4e+0At3g12600atnudt16 (Arabidopsis thaliana Nudix hydrolase homolog 16)O.I.H.G.S.X.
0.7188.20.94Zm.1324.1.A1_atAY106711.1hypothetical protein LOC100274108-1e-1At4g02050sugar transporter, putativeO.I.H.G.S.X.
0.6986.50.96Zm.2183.1.A1_atBM335799phospholipase/Carboxylesterase family protein-6e+0At4g36640SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.H.G.S.X.
0.6785.80.96Zm.12352.1.S1_atCF029529--1e+0At1g78660gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putativeO.I.H.G.S.X.
0.6481.70.96Zm.1494.1.S1_atAY105986.1hypothetical protein LOC100279492-1e-2At2g20825ULT2 (ULTRAPETALA 2)O.I.H.G.S.X.
0.5674.40.94Zm.1157.1.A1_atCF630858--4e-1At3g56890F-box family protein-relatedO.I.H.G.S.X.
0.5369.10.97ZmAffx.1086.1.A1_atAW018229--3e+0At2g01755unknown proteinO.I.H.G.S.X.
0.5065.70.97Zm.7409.1.A1_atCF042542hypothetical protein LOC100191559-2e-1At4g15790unknown proteinO.I.H.G.S.X.
0.4658.40.96Zm.4529.2.S1_atBM333157--8e+0Atmg00050-O.I.H.G.S.X.
0.4352.80.97Zm.17564.1.S1_atCK369792AGG2-2e+0At1g68585unknown proteinO.I.H.G.S.X.
0.3844.20.95Zm.3855.1.S1_atAA979788--2e+0At4g38680GRP2 (GLYCINE RICH PROTEIN 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.698.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.997.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.294.5GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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