Co-expression analysis

Gene ID Zm.6306.2.A1_at
Gene name Protein kinase catalytic domain
Homology with ArabidopsisSimilar to At1g35670: ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2) (HF=1e-10)
Module size 6 genes
NF 0.56
%ile 74.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.95Zm.6306.2.A1_atAI691326Protein kinase catalytic domain-1e-10At1g35670ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)O.I.H.G.S.X.
0.7389.90.95ZmAffx.225.1.S1_atAI670237--1e+1At5g09470mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.6077.80.96Zm.8110.1.A1_atCF623866hypothetical protein LOC100278802-3e-25At5g49820emb1879 (embryo defective 1879)O.I.H.G.S.X.
0.5065.70.95Zm.4426.1.A1_atCF017278hypothetical protein LOC100273544-1e+0At1g78020senescence-associated protein-relatedO.I.H.G.S.X.
0.4048.50.96Zm.19299.1.A1_atBM074654--4e-3At4g09270unknown proteinO.I.H.G.S.X.
0.2115.50.95Zm.5451.1.S1_atAI621979--8e-4At4g36970remorin family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.296.9GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
4.396.1GSM202304B73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
4.195.9GSM202307B73xMo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
4.095.8GSM202292B73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
4.095.8GSM202302B73xMo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
4.095.8GSM202299Mo17xB73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
4.095.8GSM202295Mo17xB73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.895.5GSM202306Mo17xB73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.595.1GSM202310B73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
3.394.7GSM202303Mo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os12g0169800, orthologous to the query gene, Zm.6306.2.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8796.6Os12g0169800At1g35670-Calcium-dependent protein kinase SK5 (EC 2.7.1.-)(CDPK)2e-8At4g09570CPK4O.I.H.G.S.X.
0.5877.0Os12g0617900At1g35670-Serine/threonine protein phosphatase BSL2 (EC3.1.3.16) (BSU1-like protein 2)5e-109At2g27210kelch repeat-containing serine/threonine phosphoesterase family proteinO.I.H.G.S.X.
0.5573.7Os02g0101700At1g35670-HECT ubiquitin-protein ligase 3 (KAKTUS protein)2e-14At4g38600KAK (KAKTUS)O.I.H.G.S.X.
0.5471.9Os03g0833300At1g35670-SBP domain containing protein1e-4At2g47070SPL1 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1)O.I.H.G.S.X.
0.5471.9Os10g0575200At1g35670-Protein psi1 (Protein psi)1e-30At2g26890GRV2 (GRAVITROPISM DEFECTIVE 2)O.I.H.G.S.X.
0.5371.3Os09g0434000At1g35670-FYVE/PHD zinc finger domain containing protein9e-30At3g43240ARID/BRIGHT DNA-binding domain-containing proteinO.I.H.G.S.X.
0.5371.3Os07g0632600At1g35670-Heat shock protein DnaJ, N-terminal domaincontaining protein1e+0At4g29080PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2)O.I.H.G.S.X.
0.5168.7Os05g0292200At1g35670-Transcription factor IIA large subunit (TFIIA-L1)3e+0At4g14315unknown proteinO.I.H.G.S.X.
0.5068.0Os03g0395600At1g35670-Hypothetical protein4e-1At1g30260-O.I.H.G.S.X.
0.4863.7Os09g0281600At1g35670-SWAP/Surp domain containing protein6e-12At3g52120SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing proteinO.I.H.G.S.X.
0.4863.7Os02g0550000At1g35670-Conserved hypothetical protein7e+0At5g11360-O.I.H.G.S.X.
0.4660.9Os03g0366200At1g35670-CaMK13e-14At3g19100calcium-dependent protein kinase, putative / CDPK, putativeO.I.H.G.S.X.
0.4660.9Os04g0440100At1g35670-Nonsense-mediated decay UPF3 domain containingprotein2e-9At1g33980Smg-4/UPF3 family proteinO.I.H.G.S.X.
0.4558.8Os11g0148700At1g35670-Zn-finger-like, PHD finger domain containingprotein7e+0At5g35210peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family proteinO.I.H.G.S.X.
0.4558.8Os05g0562400At1g35670-DDT domain containing protein2e-7At1g28420HB-1 (homeobox-1)O.I.H.G.S.X.
0.4558.8Os07g0495900At1g35670-Regulator of nonsense transcripts 1 homolog1e-6At5g47010LBA1 (LOW-LEVEL BETA-AMYLASE 1)O.I.H.G.S.X.
0.4458.1Os12g0102400At1g35670-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein6e-16At3g45630RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4253.9Os03g0214900At1g35670-Hypothetical protein1e-1At5g45860Bet v I allergen family proteinO.I.H.G.S.X.
0.4152.4Os03g0281600At1g35670-Ca2+-ATPase1e-63At1g07670calcium-transporting ATPaseO.I.H.G.S.X.
0.4152.4Os03g0213300At1g35670-Hypothetical protein7e-1At1g47495unknown proteinO.I.H.G.S.X.
0.4051.1Os08g0474700At1g35670--1e-13At2g21630transport protein, putativeO.I.H.G.S.X.
0.4051.1Os03g0223700At1g35670-ARM repeat fold domain containing protein2e-49At2g01690bindingO.I.H.G.S.X.
0.4051.1Os01g0945800At1g35670-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein2e-17At4g36960RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4051.1Os07g0163800At1g35670-Ubiquitin-specific protease 122e-89At5g06600UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12)O.I.H.G.S.X.
0.4051.1Os03g0750800At1g35670-Transcriptional adaptor ADA2b (AT4g16420/dl4235c)9e-11At4g16420ADA2B (HOMOLOG OF YEAST ADA2 2B)O.I.H.G.S.X.
0.3948.3Os04g0195000At1g35670-Vacuolar assembly protein VPS41 homolog2e-24At1g08190vacuolar assembly protein, putative (VPS41)O.I.H.G.S.X.
0.3948.3Os09g0515800At1g35670-RabGAP/TBC domain containing protein3e-19At2g30710RabGAP/TBC domain-containing proteinO.I.H.G.S.X.
0.3846.9Os02g0787500At1g35670-The start codon is not identified.7e-39At4g32600zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3541.7Os05g0126300At1g35670-Conserved hypothetical protein1e-2At3g57740protein kinase family proteinO.I.H.G.S.X.
0.3440.0Os08g0137100At1g35670-Polycomb group protein FIE2(FERTILIZATION-INDEPENDENT ENDOSPERM 2)1e-24At3g20740FIE (FERTILIZATION-INDEPENDENT ENDOSPERM)O.I.H.G.S.X.
0.3440.0Os03g0427900At1g35670-U box domain containing protein1e-4At5g15400U-box domain-containing proteinO.I.H.G.S.X.
0.3236.3Os01g0897800At1g35670-Rad21/Rec8 like protein, N-terminal domaincontaining protein8e-37At5g16270SYN4 (SISTER CHROMATID COHESION 1 PROTEIN 4)O.I.H.G.S.X.
0.3236.3Os10g0182000At1g35670-Alanyl-tRNA synthetase, mitochondrial precursor(EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS)3e-23At1g50200ALATS (ALANYL-TRNA SYNTHETASE)O.I.H.G.S.X.
0.3032.7Os01g0744300At1g35670-Casein kinase-like protein4e-15At2g25760protein kinase family proteinO.I.H.G.S.X.
0.2931.1Os02g0781800At1g35670-WD40-like domain containing protein6e-10At3g54190-O.I.H.G.S.X.
0.2831.1Os08g0537800At1g35670-The start codon is not identified.4e-2At2g3760060S ribosomal protein L36 (RPL36A)O.I.H.G.S.X.
0.2625.6Os01g0235800At1g35670-KH, type 1 domain containing protein3e-1At1g20450ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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