Co-expression analysis

Gene ID Zm.6306.2.A1_at
Gene name Protein kinase catalytic domain
Homology with ArabidopsisSimilar to At1g35670: ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2) (HF=1e-10)
Module size 6 genes
NF 0.56
%ile 74.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.95Zm.6306.2.A1_atAI691326Protein kinase catalytic domain-1e-10At1g35670ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)O.I.H.G.S.X.
0.7389.90.95ZmAffx.225.1.S1_atAI670237--1e+1At5g09470mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.6077.80.96Zm.8110.1.A1_atCF623866hypothetical protein LOC100278802-3e-25At5g49820emb1879 (embryo defective 1879)O.I.H.G.S.X.
0.5065.70.95Zm.4426.1.A1_atCF017278hypothetical protein LOC100273544-1e+0At1g78020senescence-associated protein-relatedO.I.H.G.S.X.
0.4048.50.96Zm.19299.1.A1_atBM074654--4e-3At4g09270unknown proteinO.I.H.G.S.X.
0.2115.50.95Zm.5451.1.S1_atAI621979--8e-4At4g36970remorin family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.296.9GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
4.396.1GSM202304B73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
4.195.9GSM202307B73xMo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
4.095.8GSM202292B73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
4.095.8GSM202302B73xMo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
4.095.8GSM202299Mo17xB73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
4.095.8GSM202295Mo17xB73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.895.5GSM202306Mo17xB73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.595.1GSM202310B73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
3.394.7GSM202303Mo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig6447_at, orthologous to the query gene, Zm.6306.2.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6784.7Contig6447_atAt1g35670--4e-15At1g35670ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)O.I.H.G.S.X.
0.8092.5Contig6448_atAt1g35670--1e-2At3g06000leucine-rich repeat family proteinO.I.H.G.S.X.
0.7589.5Contig3043_atAt1g35670--8e-33At3g15730PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1)O.I.H.G.S.X.
0.7187.1Contig12417_atAt1g35670--2e+0At2g03630unknown proteinO.I.H.G.S.X.
0.7187.1Contig6607_s_atAt1g35670--1e-9At2g17410ARID/BRIGHT DNA-binding domain-containing proteinO.I.H.G.S.X.
0.5774.9Contig10734_atAt1g35670--7e+0At5g14070ROXY2O.I.H.G.S.X.
0.5470.3HVSMEm0003G22r2_atAt1g35670--5e+0At1g71740unknown proteinO.I.H.G.S.X.
0.4458.9Contig4788_atAt1g35670--6e-11At1g76710SDG26 (SET DOMAIN GROUP 26)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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