Co-expression analysis

Gene ID Zm.6303.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g20950: glycosyl hydrolase family 3 protein (HF=8e-27)
Module size 25 genes
NF 0.43
%ile 50.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.60.96Zm.6303.1.S1_atAF064707.1--8e-27At5g20950glycosyl hydrolase family 3 proteinO.I.H.G.S.X.
0.6077.80.97Zm.7620.1.A1_atCF629426hypothetical protein LOC100279978-2e-3At2g24010scpl23 (serine carboxypeptidase-like 23)O.I.H.G.S.X.
0.5267.30.97Zm.10479.1.S1_atBQ486450--5e+0At5g13990ATEXO70C2 (exocyst subunit EXO70 family protein C2)O.I.H.G.S.X.
0.5267.30.97Zm.8138.1.A1_atBM336608tubby protein-1e-3At1g25280AtTLP10 (TUBBY LIKE PROTEIN 10)O.I.H.G.S.X.
0.5166.40.97Zm.13788.1.S1_atAW313252thioredoxin reductase 2-5e-5At4g35460NTRB (NADPH-DEPENDENT THIOREDOXIN REDUCTASE B)O.I.H.G.S.X.
0.5065.70.97Zm.851.1.S1_atCF007204hypothetical protein LOC100275940-3e-8At1g10590DNA-binding protein-relatedO.I.H.G.S.X.
0.4961.90.97Zm.7941.1.A1_atBM080529--1e+0At3g50040unknown proteinO.I.H.G.S.X.
0.4759.90.97Zm.494.2.S1_atBE056113Prohibitin1-3e+0At5g17510unknown proteinO.I.H.G.S.X.
0.4556.40.97Zm.13648.1.S1_atAY107241.1caleosin related protein-2e+0At1g70670caleosin-related family proteinO.I.H.G.S.X.
0.4556.40.97Zm.12433.1.S1_atAY105016.1tyrosyl-tRNA synthetase-4e-18At2g33840tRNA synthetase class I (W and Y) family proteinO.I.H.G.S.X.
0.4455.70.97Zm.12377.1.S1_atBQ577907--1e+1At3g10915reticulon family proteinO.I.H.G.S.X.
0.4455.70.98Zm.5180.1.A1_atAI612313--1e+1At5g27090AGL54O.I.H.G.S.X.
0.4352.80.97Zm.1158.1.A1_atAY107067.1--4e-31At5g10270CDKCO.I.H.G.S.X.
0.4251.30.97Zm.12031.1.A1_atBM382777--2e+1At5g05650-O.I.H.G.S.X.
0.4048.50.97Zm.17460.1.S1_atCK327598--3e+0At1g51970unknown proteinO.I.H.G.S.X.
0.3945.60.97Zm.12674.1.A1_atCN845329--5e-5At1g34350unknown proteinO.I.H.G.S.X.
0.3742.30.97Zm.6293.1.A1_atCF038760hypothetical protein LOC100216905-4e+0At5g08400unknown proteinO.I.H.G.S.X.
0.3641.30.97Zm.2016.1.S1_atAW566149zinc finger, C3HC4 type family protein-2e+0At5g51195unknown proteinO.I.H.G.S.X.
0.3538.90.97Zm.18045.1.A1_atBM080270--8e-4At1g22180SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.H.G.S.X.
0.3437.20.98Zm.18374.1.A1_atCO521737hypothetical protein LOC100191144-1e-1At1g21890nodulin MtN21 family proteinO.I.H.G.S.X.
0.3336.00.97Zm.10098.1.A1_atCO531187hypothetical protein LOC100272958-2e-2At2g44060late embryogenesis abundant family protein / LEA family proteinO.I.H.G.S.X.
0.3131.60.97Zm.15194.1.A1_atBM334114--4e+0At1g16025unknown proteinO.I.H.G.S.X.
0.3131.60.97Zm.463.1.A1_atU95953.1viviparous14-5e-6At3g14440NCED3 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3)O.I.H.G.S.X.
0.2928.10.97Zm.5093.1.A1_atAI600800GAGA-binding protein-4e-4At1g14685BPC2 (BASIC PENTACYSTEINE 2)O.I.H.G.S.X.
0.2318.60.97Zm.18278.1.S1_atCK371368--1e-26At3g52200LTA3O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.899.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.398.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.298.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.598.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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