Co-expression analysis

Gene ID Zm.6270.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g26520: TIP2 (TONOPLAST INTRINSIC PROTEIN 2) (HF=3e+0)
Module size 10 genes
NF 0.32
%ile 30.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.95Zm.6270.1.A1_atAI691207--3e+0At3g26520TIP2 (TONOPLAST INTRINSIC PROTEIN 2)O.I.H.G.S.X.
0.3844.20.96Zm.12742.1.A1_atCD440044prefoldin subunit 2-1e-1At1g68490unknown proteinO.I.H.G.S.X.
0.3538.90.95Zm.5309.1.A1_a_atAI619196hypothetical protein LOC100192865 /// proteasome subunit beta type 4-7e-10At1g56450PBG1O.I.H.G.S.X.
0.3437.20.96Zm.3983.2.A1_atAI820263--8e-1At3g60510enoyl-CoA hydratase/isomerase family proteinO.I.H.G.S.X.
0.3131.60.96Zm.4321.1.S1_atAI855098hypothetical protein LOC100191344-2e-1At3g51600LTP5 (Lipid transfer protein 5)O.I.H.G.S.X.
0.3131.60.97Zm.18325.1.S1_atCO530408lipid binding protein-2e+0At5g02560HTA12O.I.H.G.S.X.
0.3131.60.98Zm.14536.1.A1_atAY187719.1SET domain protein SDG117-5e-1At1g55260lipid bindingO.I.H.G.S.X.
0.2521.30.96Zm.15500.1.S1_atAY112192.1--4e+0At4g29970F-box family proteinO.I.H.G.S.X.
0.2521.30.96Zm.17280.1.S1_atCK369569--7e-2At1g03900ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)O.I.H.G.S.X.
0.2014.20.96Zm.4820.2.S1_atCF243727hypothetical protein LOC100192684-3e-30At5g53300UBC10 (ubiquitin-conjugating enzyme 10)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.399.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.799.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.398.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.598.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.998.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage