Co-expression analysis

Gene ID Zm.626.1.S1_at
Gene name sulfate transporter ST1
Homology with ArabidopsisSimilar to At1g78000: SULTR1 (HF=9e-5)
Module size 25 genes
NF 0.36
%ile 37.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7288.60.95Zm.626.1.S1_atAF355602.1sulfate transporter ST1-9e-5At1g78000SULTR1O.I.H.G.S.X.
0.6682.30.96Zm.2220.3.S1_atCA826703hypothetical protein LOC100273713-9e-4At3g55450protein kinase, putativeO.I.H.G.S.X.
0.4556.40.97Zm.3583.2.S1_atAY105229.1Hypothetical protein LOC100191673-2e+0At1g14980CPN10 (CHAPERONIN 10)O.I.H.G.S.X.
0.4556.40.97Zm.19146.1.A1_atCO533664hypothetical protein LOC100193961-5e-1At3g09050unknown proteinO.I.H.G.S.X.
0.4149.70.97Zm.9238.1.A1_atCO533275--5e-2At2g23320WRKY15O.I.H.G.S.X.
0.4149.70.97Zm.1928.1.A1_atCK368069hypothetical protein LOC100279329-6e+0At3g46000ADF2 (ACTIN DEPOLYMERIZING FACTOR 2)O.I.H.G.S.X.
0.4048.50.96Zm.19335.1.A1_atCO521700hypothetical protein LOC100279445-6e-4At3g22440hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3945.60.96Zm.1554.2.A1_x_atBQ047837--2e-21At3g07760-O.I.H.G.S.X.
0.3844.20.97Zm.12810.1.A1_atCA399348--5e+0At3g10120unknown proteinO.I.H.G.S.X.
0.3641.30.96Zm.222.1.S1_atAB024291.1cytokinin response regulator2-4e-1At1g10470ARR4 (RESPONSE REGULATOR 4)O.I.H.G.S.X.
0.3641.30.97Zm.6438.1.A1_atBM268459hypothetical protein LOC100191671-1e-30At1g22170phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.H.G.S.X.
0.3437.20.96Zm.17256.1.A1_atCK347596hypothetical protein LOC100192725-2e+0At1g73620thaumatin-like protein, putative / pathogenesis-related protein, putativeO.I.H.G.S.X.
0.3437.20.96Zm.5453.1.A1_atCF623623Hypothetical protein LOC100217027-1e-16At2g27040AGO4 (ARGONAUTE 4)O.I.H.G.S.X.
0.3233.40.97Zm.12634.6.S1_atCD446319hypothetical protein LOC100193874-8e-55At3g04400emb2171 (embryo defective 2171)O.I.H.G.S.X.
0.3029.80.96Zm.11505.1.S1_atCF272773Hypothetical protein LOC100191385-6e-1At1g05291unknown proteinO.I.H.G.S.X.
0.2928.10.96Zm.6923.1.S1_atAY104489.1--8e-1At5g01410RSR4 (REDUCED SUGAR RESPONSE 4)O.I.H.G.S.X.
0.2928.10.96Zm.4049.1.A1_atAI834098hypothetical protein LOC100279705-1e+0At5g14130peroxidase, putativeO.I.H.G.S.X.
0.2928.10.97Zm.16892.3.S1_x_atCB281906calmodulin binding protein-5e-3At3g22190IQD5 (IQ-domain 5)O.I.H.G.S.X.
0.2928.10.97Zm.12269.2.A1_atAW256119Hypothetical protein LOC100193070-2e-4At3g14130(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeO.I.H.G.S.X.
0.2928.10.97Zm.18469.1.S1_atBM378527oxidoreductase-2e-7At4g13250short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.2828.10.97Zm.12789.1.A1_atCA398899--9e-3At3g04510LSH2 (LIGHT SENSITIVE HYPOCOTYLS 2)O.I.H.G.S.X.
0.2724.60.96Zm.788.1.A1_x_atAY103572.1Hypothetical protein LOC100194151-7e-72At3g27240cytochrome c1, putativeO.I.H.G.S.X.
0.2724.60.97Zm.14407.2.S1_atAW424519hypothetical protein LOC100272648-3e-140At1g56070LOS1O.I.H.G.S.X.
0.2419.80.97Zm.5159.1.A1_atCA403363hypothetical protein LOC100191167-1e-2At4g28400protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.2115.50.97Zm.18485.1.S1_atAY104422.1DNA binding protein-4e-8At1g71260ATWHY2 (A. THALIANA WHIRLY 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.698.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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