Co-expression analysis

Gene ID Zm.6246.2.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g22080: unknown protein (HF=9e-7)
Module size 34 genes
NF 0.44
%ile 52.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8996.80.96Zm.6246.2.A1_atAI677558--9e-7At2g22080unknown proteinO.I.H.G.S.X.
0.8194.30.97Zm.6247.1.S1_atAF371267.1alpha zein 19kDa D1-5e-1At5g62360invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.6886.10.98Zm.7035.1.A1_atCD446757hypothetical protein LOC100280000-3e+0At3g19130ATRBP47B (RNA-binding protein 47B)O.I.H.G.S.X.
0.5469.80.98Zm.7120.1.S1_a_atAY105061.1hypothetical protein LOC100193616-2e-6At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeO.I.H.G.S.X.
0.5166.40.99Zm.7144.1.A1_atCD437816chalcone isomerase 3-2e+0At1g73260trypsin and protease inhibitor family protein / Kunitz family proteinO.I.H.G.S.X.
0.5166.40.98Zm.3526.1.S1_atCF041723hypothetical protein LOC100272649-3e+0At2g01890PAP8 (PURPLE ACID PHOSPHATASE 8)O.I.H.G.S.X.
0.4861.30.98Zm.1323.1.S1_x_atAY107806.1hypothetical protein LOC100275312-6e+0At3g30840unknown proteinO.I.H.G.S.X.
0.4759.90.98Zm.13232.1.S1_atCA452744tyrosine/DOPA decarboxylase 2-9e-1At2g04630NRPB6BO.I.H.G.S.X.
0.4658.40.98Zm.16049.2.A1_x_atCF042888--3e-4At5g0385040S ribosomal protein S28 (RPS28B)O.I.H.G.S.X.
0.4658.40.98Zm.14471.3.S1_atCA404574hypothetical protein LOC100191368-2e-25At2g4412060S ribosomal protein L7 (RPL7C)O.I.H.G.S.X.
0.4658.40.99Zm.16593.4.S1_atCA401361hypothetical protein LOC100194160-2e-4At5g51840unknown proteinO.I.H.G.S.X.
0.4556.40.99Zm.7091.1.A1_x_atU23190.1chlorophyll a/b-binding apoprotein CP24 precursor-3e-15At1g15820LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6)O.I.H.G.S.X.
0.4556.40.98Zm.16513.7.A1_atCA405325hypothetical protein LOC100191561-0At5g09810ACT7 (ACTIN 7)O.I.H.G.S.X.
0.4556.40.98Zm.7144.1.S1_atCD437816--2e+0At1g73260trypsin and protease inhibitor family protein / Kunitz family proteinO.I.H.G.S.X.
0.4455.70.98Zm.3219.1.S1_a_atAY197352.1beta-expansin 9 protein-9e+0At4g32950protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.4455.70.98Zm.6113.1.A1_atCF630251--7e-2At4g22745MBD1O.I.H.G.S.X.
0.4352.80.98Zm.3217.1.A1_atAY106001.1hypothetical protein LOC100193166-4e-12At1g63900zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4251.30.99Zm.7121.1.A1_atAY104050.1hypothetical protein LOC100191328-2e-5At3g12120FAD2 (FATTY ACID DESATURASE 2)O.I.H.G.S.X.
0.4251.30.98Zm.6482.1.A1_atAY111229.1hypothetical protein LOC100216804-5e-1At2g46050pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.4251.30.98Zm.16259.1.A1_x_atBQ539455hypothetical protein LOC100273269-1e-6At4g27230HTA2 (histone H2A)O.I.H.G.S.X.
0.4149.70.97Zm.16534.1.S1_atCF602562--8e+0At5g04350self-incompatibility protein-relatedO.I.H.G.S.X.
0.4149.70.98Zm.14473.1.A1_a_atAI665307--1e-10At2g23350PAB4 (POLY(A) BINDING PROTEIN 4)O.I.H.G.S.X.
0.4048.50.98Zm.6103.2.S1_atAY104019.1UBA and UBX domain-containing protein-2e-1At4g04210PUX4O.I.H.G.S.X.
0.4048.50.98Zm.14507.1.A1_a_atCO524101glycosyl hydrolases family 16 protein-1e-2At1g11545xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeO.I.H.G.S.X.
0.4048.50.98Zm.16967.1.A1_atCF972515--2e+0At1g12090ELP (EXTENSIN-LIKE PROTEIN)O.I.H.G.S.X.
0.3945.60.98Zm.7328.1.S1_atCF628905kinesin-like protein1-1e-13At4g24170kinesin motor family proteinO.I.H.G.S.X.
0.3844.20.98Zm.3743.2.S1_atAY109746.1--2e+0At5g04045Expressed proteinO.I.H.G.S.X.
0.3844.20.99Zm.7090.1.S1_atAY105718.1hypothetical protein LOC100191899-6e+0At5g01740-O.I.H.G.S.X.
0.3641.30.99Zm.7034.2.A1_a_atAI770602hypothetical protein LOC100279884-1e+0At4g18080unknown proteinO.I.H.G.S.X.
0.3538.90.98Zm.5190.1.A1_atCF006531Pyruvate kinase-like-9e-44At5g52920PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1)O.I.H.G.S.X.
0.3029.80.99Zm.6061.1.S1_atAY109202.1hypothetical protein LOC100192928-2e-46At5g20570RBX1 (RING-BOX 1)O.I.H.G.S.X.
0.2928.10.99Zm.606.1.A2_s_atAF326493.1plasma membrane integral protein ZmPIP2-2 /// plasma membrane intrinsic protein2-1e-37At2g37180RD28 (RESPONSIVE TO DESICCATION 28)O.I.H.G.S.X.
0.2828.10.98Zm.5823.1.A1_atCO520297hypothetical protein LOC100194104-2e-10At1g14310haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.2622.70.99Zm.16532.4.S1_x_atBI42368260S ribosomal protein L18a-7e-68At2g3448060S ribosomal protein L18A (RPL18aB)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.396.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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