Co-expression analysis

Gene ID	Zm.6195.1.A1_at
Gene name	hypothetical protein LOC100275106
Homology with Arabidopsis	Similar to At4g17790: - (HF=4e+0)
Module size	6 genes
NF	0.28
%ile	24.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	69.1	0.96	Zm.6195.1.A1_at	AI668513	hypothetical protein LOC100275106	-	4e+0	At4g17790	-	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.97	Zm.7166.1.A1_at	AF200532.1	cellulose synthase8	-	3e-36	At4g39350	CESA2 (CELLULOSE SYNTHASE A2)	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.97	Zm.14057.2.S1_at	AF457961.1	-	-	8e-20	At4g22910	FZR2 (FIZZY-RELATED 2)	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.98	Zm.4238.1.A1_at	BM073006	cleavage and polyadenylation specificity factor, 100 kDa subunit	-	8e-1	At2g14282	SCRL18 (SCR-Like 18)	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.97	Zm.988.1.S1_at	CD433236	-	-	2e+0	At5g24510	60s acidic ribosomal protein P1, putative	O.I.	H.G.	S.X.	Please select
0.15	8.6	0.97	Zm.2119.1.A1_at	AI665420	-	-	8e-5	At3g23890	TOPII (TOPOISOMERASE II)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.7	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.7	98.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.9	98.5	GSM162264	Mutant 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
10.7	98.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.1	98.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.1	98.4	GSM205424	Mo17 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
10.0	98.4	GSM205420	Mo17 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
10.0	98.4	GSM205431	Mo17 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
9.7	98.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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