Co-expression analysis

Gene ID Zm.6170.1.A1_a_at
Gene name hypothetical protein LOC100274450
Homology with ArabidopsisSimilar to At2g17390: AKR2B (ANKYRIN REPEAT-CONTAINING 2B) (HF=1e-5)
Module size 6 genes
NF 0.44
%ile 52.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4048.50.97Zm.6170.1.A1_a_atAY107283.1hypothetical protein LOC100274450-1e-5At2g17390AKR2B (ANKYRIN REPEAT-CONTAINING 2B)O.I.H.G.S.X.
0.6785.80.97Zm.5273.1.A1_atBM497669hypothetical protein LOC100272886-7e-1At2g39990EIF2O.I.H.G.S.X.
0.6785.80.98Zm.14034.1.A1_atCD955909hypothetical protein LOC100273157-4e-14At5g53140protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.5065.70.97Zm.1056.1.S1_atAW120162ribosomal protein S22 homolog-3e-17At5g6230040S ribosomal protein S20 (RPS20C)O.I.H.G.S.X.
0.4455.70.97Zm.3620.1.S1_atAW076176--5e+0At5g28610-O.I.H.G.S.X.
0.2014.20.97ZmAffx.563.1.S1_atAI714606--3e+0At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.697.1GSM253275ZM_8d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
5.096.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM253274ZM_8d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
4.296.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM253276ZM_8d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.995.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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