Co-expression analysis

Gene ID	Zm.6149.1.A1_at
Gene name	omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2
Homology with Arabidopsis	Similar to At5g43070: WPP1 (WPP domain protein 1) (HF=9e-1)
Module size	6 genes
NF	0.77
%ile	96.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	75.1	0.98	Zm.6149.1.A1_at	CA399198	omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2	-	9e-1	At5g43070	WPP1 (WPP domain protein 1)	O.I.	H.G.	S.X.	Please select
0.77	92.1	0.97	Zm.16982.1.A1_at	CF972418	-	-	3e-10	At3g44340	CEF (clone eighty-four)	O.I.	H.G.	S.X.	Please select
0.77	92.1	0.98	Zm.18351.1.S1_at	CO529439	-	-	2e+0	At2g21140	ATPRP2 (PROLINE-RICH PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.77	92.1	0.98	Zm.3358.2.S1_at	AY105740.1	-	-	7e+0	At2g44420	protein N-terminal asparagine amidohydrolase family protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.13016.1.A1_at	CA403346	hypothetical protein LOC100277160	-	2e+0	At1g22160	senescence-associated protein-related	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.18352.1.S1_at	CO527044	glucan endo-1,3-beta-glucosidase, acidic isoform	-	1e+1	At5g62470	MYB96 (myb domain protein 96)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.4	98.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.7	98.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.5	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.4	92.2	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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