Co-expression analysis

Gene ID Zm.6142.1.A1_at
Gene name annexin p33
Homology with ArabidopsisSimilar to At5g10220: ANN6 (ANNEXIN ARABIDOPSIS 6) (HF=2e-1)
Module size 7 genes
NF 0.62
%ile 83.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5267.30.96Zm.6142.1.A1_atAY105151.1annexin p33-2e-1At5g10220ANN6 (ANNEXIN ARABIDOPSIS 6)O.I.H.G.S.X.
0.7590.80.96Zm.5851.6.A1_a_atL46399.1MADS box protein-2e-8At4g18960AG (AGAMOUS)O.I.H.G.S.X.
0.6785.80.96Zm.17295.1.A1_atCK347563--2e+0At2g18050HIS1-3 (HISTONE H1-3)O.I.H.G.S.X.
0.6785.80.97Zm.4406.1.A1_atAI834053splicing factor, arginine/serine-rich 12-2e+0At2g26695binding / zinc ion bindingO.I.H.G.S.X.
0.6381.10.96Zm.1934.1.S1_s_atAW519956hypothetical protein LOC100216744 /// glycerophosphodiester phosphodiesterase-3e+0At1g62770invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.5369.10.97Zm.17374.2.A1_a_atCF637833--1e+0At3g43490zinc knuckle (CCHC-type) family proteinO.I.H.G.S.X.
0.4455.70.97Zm.5796.2.S1_atAY107655.1--3e-18At5g66420-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.598.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.1301.68.S1_s_at, orthologous to the query gene, Zm.6142.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5374.2GmaAffx.1301.68.S1_s_atAt5g10220--6e-2At1g35720ANNAT1 (ANNEXIN ARABIDOPSIS 1)O.I.H.G.S.X.
0.5071.7GmaAffx.1301.59.S1_atAt5g10220--5e-2At1g35720ANNAT1 (ANNEXIN ARABIDOPSIS 1)O.I.H.G.S.X.
0.1619.7GmaAffx.1301.22.S1_s_atAt5g10220--8e-2At5g65020ANNAT2 (Annexin Arabidopsis 2)O.I.H.G.S.X.
0.1114.2Gma.1749.3.S1_atAt5g10220--4e+0At4g04630unknown proteinO.I.H.G.S.X.
0.0710.2Gma.2688.3.S1_a_atAt5g10220--7e-8At5g07390ATRBOHA (respiratory burst oxidase homolog A)O.I.H.G.S.X.
0.069.0Gma.338.2.S1_s_atAt5g10220cationic peroxidase 2 /// peroxidase-2e-27At4g21960PRXR1O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage