Co-expression analysis

Gene ID Zm.6131.1.S1_at
Gene name hypothetical protein LOC100191528
Homology with ArabidopsisSimilar to At1g74560: NRP1 (NAP1-RELATED PROTEIN 1) (HF=7e-1)
Module size 9 genes
NF 0.65
%ile 87.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5065.70.97Zm.6131.1.S1_atAY105213.1hypothetical protein LOC100191528-7e-1At1g74560NRP1 (NAP1-RELATED PROTEIN 1)O.I.H.G.S.X.
0.8094.00.97Zm.1481.1.A1_atBG841913hypothetical protein LOC100279302-1e-1At5g16400ATF2O.I.H.G.S.X.
0.7892.50.97Zm.6402.1.S1_atAY103865.1DELLA protein DWARF8-3e-1At3g03450RGL2 (RGA-LIKE 2)O.I.H.G.S.X.
0.6785.80.97Zm.4710.1.A1_atAI738125hypothetical protein LOC100280041-3e+0At4g34410RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1)O.I.H.G.S.X.
0.6785.80.97Zm.14354.1.S1_x_atCK37030340S ribosomal protein S29 /// 40S ribosomal protein S29-2e-11At4g3386540S ribosomal protein S29 (RPS29C)O.I.H.G.S.X.
0.5775.10.97Zm.2713.2.A1_atAI881541--1e-30At5g60790ATGCN1O.I.H.G.S.X.
0.5775.10.97Zm.18229.1.A1_atCN845146hypothetical protein LOC100279386-7e+0At5g66320zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.5571.60.97Zm.5196.1.A1_atBM334572PHD-finger family protein-1e+0At2g24430ANAC038 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 38)O.I.H.G.S.X.
0.4455.70.97Zm.2728.1.A1_atAW067000--1e+0At3g49100signal recognition particle 9 kDa protein, putative / SRP9, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.697.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.696.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.190.8GSM258174B84 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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