Co-expression analysis

Gene ID Zm.6103.3.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g21010: unknown protein (HF=8e-1)
Module size 6 genes
NF 0.71
%ile 92.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.98Zm.6103.3.S1_atAI668289--8e-1At1g21010unknown proteinO.I.H.G.S.X.
0.8094.00.98Zm.16462.1.A1_atAY347711.1Xaa-His dipeptidase; X-His dipeptidase; beta-alanyl-histidine dipeptidase-7e+0At5g57685AtGDU3 (Arabidopsis thaliana GLUTAMINE DUMPER 3)O.I.H.G.S.X.
0.7792.10.98Zm.6915.1.S1_atAW256266hypothetical protein LOC100280116-5e-1At5g64160unknown proteinO.I.H.G.S.X.
0.6381.10.98Zm.12244.1.A1_atAY105130.1--4e-8At2g37500arginine biosynthesis protein ArgJ familyO.I.H.G.S.X.
0.5674.40.98Zm.6916.1.S1_atAW067358hypothetical protein LOC100273981-9e-13At5g66750CHR1 (CHROMATIN REMODELING 1)O.I.H.G.S.X.
0.4759.90.98Zm.3743.2.S1_atAY109746.1--2e+0At5g04045Expressed proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8395.60.98ZmAffx.707.1.A1_atAI738220transposon protein-8e-1At5g03310auxin-responsive family proteinO.I.H.G.S.X.
0.6785.80.97Zm.3249.1.A1_atCF244824COV1-like protein-5e+0At5g08350GRAM domain-containing protein / ABA-responsive protein-relatedO.I.H.G.S.X.
0.6381.10.98Zm.716.1.A1_atCO521300hypothetical protein LOC100279404-5e+0At5g57535unknown proteinO.I.H.G.S.X.
0.6381.10.97Zm.5964.1.S1_a_atAY109203.1zinc finger C-x8-C-x5-C-x3-H type family protein-6e-4At4g21610LOL2 (LSD ONE LIKE 2)O.I.H.G.S.X.
0.5976.10.98Zm.3657.1.A1_s_atBG874068--1e+0At5g42635glycine-rich proteinO.I.H.G.S.X.
0.5674.40.97Zm.584.4.A1_atAY104089.1pericarp color1-3e-8At4g38620MYB4O.I.H.G.S.X.
0.5369.10.98Zm.6173.1.A1_atCF011964IDP22 protein-2e+0At1g17615disease resistance protein (TIR-NBS class), putativeO.I.H.G.S.X.
0.5369.10.98Zm.7017.1.A1_atBM072990hypothetical protein LOC100272933-2e+0At1g31760SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.5065.70.97Zm.16533.1.S1_atAW46104560S ribosomal protein L37-6e-3At1g5230060S ribosomal protein L37 (RPL37B)O.I.H.G.S.X.
0.5065.70.98Zm.2157.7.S1_atCF019402ribosomal protein S11-1e-38At4g3080040S ribosomal protein S11 (RPS11B)O.I.H.G.S.X.
0.5065.70.99Zm.3743.2.A1_a_atCF624095hypothetical protein LOC100274177-2e+0At5g04045Expressed proteinO.I.H.G.S.X.
0.4455.70.98Zm.4323.1.S1_atAY110219.1--2e+0At1g49150unknown proteinO.I.H.G.S.X.
0.4048.50.95Zm.17602.1.S1_atCF629187--1e+0At3g58230unknown proteinO.I.H.G.S.X.
0.4048.50.96Zm.6178.1.A1_atAY110570.1auxin Efflux Carrier family protein-1e+0At4g34960peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putativeO.I.H.G.S.X.
0.4048.50.96Zm.2113.1.S1_atAW267577hypothetical protein LOC100277741-6e-6At3g19630radical SAM domain-containing proteinO.I.H.G.S.X.
0.4048.50.97Zm.128.1.S1_atX69152.1octopine synthase binding factor3-2e-1At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)O.I.H.G.S.X.
0.4048.50.98Zm.250.1.S1_atCF007330basal layer antifungal protein2 /// hypothetical protein LOC100193396 /// hypothetical protein LOC100279097-5e+0At3g06000leucine-rich repeat family proteinO.I.H.G.S.X.
0.4048.50.98Zm.8514.1.S1_atAY104758.1--5e+0At5g35525unknown proteinO.I.H.G.S.X.
0.4048.50.98Zm.5592.1.S1_atAY111384.1--9e-2At5g66052unknown proteinO.I.H.G.S.X.
0.4048.50.98Zm.1682.1.A1_a_atCK368815hypothetical protein LOC100193549 /// ran-binding protein 1-6e-10At1g07140SIRANBPO.I.H.G.S.X.
0.3945.60.97Zm.14507.1.A1_x_atCO524101glycosyl hydrolases family 16 protein-1e-2At1g11545xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeO.I.H.G.S.X.
0.3945.60.97Zm.12526.1.S1_atAI734393--3e+0At1g58150unknown proteinO.I.H.G.S.X.
0.3844.20.96Zm.11758.1.A1_atCF028197gibberellin 20 oxidase 2-1e-3At1g066402-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.3742.30.96Zm.10662.2.S1_atCF244281--2e+0At3g24516unknown proteinO.I.H.G.S.X.
0.3641.30.98Zm.6130.1.S1_atCF056233Hypothetical protein LOC100216775-3e-8At4g14770TCX2 (TESMIN/TSO1-LIKE CXC 2)O.I.H.G.S.X.
0.3641.30.98Zm.12150.2.S1_atAI619383hypothetical protein LOC100273319-9e-1At4g31340myosin heavy chain-relatedO.I.H.G.S.X.
0.3538.90.97Zm.4124.1.A1_atAI855023hypothetical protein LOC100273075-3e-1At2g35710glycogenin glucosyltransferase (glycogenin)-relatedO.I.H.G.S.X.
0.3538.90.97Zm.4327.1.S1_atBI993026--1e-15At4g12770heat shock protein bindingO.I.H.G.S.X.
0.3336.00.94Zm.5699.1.A1_atBM333318ras-related protein Rab7 /// ras-related protein Rab7-2e-44At3g18820ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F)O.I.H.G.S.X.
0.3336.00.97Zm.6855.1.A1_atCK369715hypothetical protein LOC100193041-7e+0At2g14378-O.I.H.G.S.X.
0.3233.40.95Zm.11757.1.A1_atBM380508hypothetical protein LOC100277488-5e+0At5g0951040S ribosomal protein S15 (RPS15D)O.I.H.G.S.X.
0.3131.60.98Zm.16355.1.A1_atCF349220--2e-4At1g59740proton-dependent oligopeptide transport (POT) family proteinO.I.H.G.S.X.
0.3029.80.97Zm.8890.1.S1_a_atBM379881hypothetical protein LOC100191584-1e-8At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)O.I.H.G.S.X.
0.3029.80.97Zm.567.1.A1_atAF201459.1profilin 5-8e-60At2g44100ATGDI1 (ARABIDOPSIS THALIANA GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1)O.I.H.G.S.X.
0.2928.10.97Zm.16043.1.S1_atCF244554--3e+1At5g26262unknown proteinO.I.H.G.S.X.
0.2928.10.94Zm.5244.1.A1_atCD44653960S ribosomal protein L9-4e-20At1g3312060S ribosomal protein L9 (RPL90B)O.I.H.G.S.X.
0.2928.10.96Zm.6856.1.A1_atAI065480hypothetical protein LOC100274162-1e+0At1g36622unknown proteinO.I.H.G.S.X.
0.2928.10.98Zm.16534.1.S1_atCF602562--8e+0At5g04350self-incompatibility protein-relatedO.I.H.G.S.X.
0.2928.10.98Zm.6180.1.S1_atCF031407hypothetical protein LOC100277615-1e-5At4g10430-O.I.H.G.S.X.
0.2928.10.98Zm.8953.1.A1_atAY104644.1hypothetical protein LOC100280204-1e-3At5g18630lipase class 3 family proteinO.I.H.G.S.X.
0.2724.60.95Zm.14486.1.A1_atAI964508chlorophyll a-b binding protein 6A-6e-7At3g54890LHCA1O.I.H.G.S.X.
0.2724.60.96Zm.16700.1.A1_atAY107355.1--3e-21At5g48460fimbrin-like protein, putativeO.I.H.G.S.X.
0.2724.60.98Zm.4929.2.A1_a_atAI586452hypothetical protein LOC100192571-3e+0At5g28620protein kinase C-relatedO.I.H.G.S.X.
0.2622.70.98Zm.10174.1.A1_atAY111125.1--4e+0At2g47370-O.I.H.G.S.X.
0.2521.30.97Zm.14798.2.A1_atBM380017--5e-3At3g01950unknown proteinO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.899.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.799.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.599.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.498.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.198.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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