Co-expression analysis

Gene ID	Zm.6087.1.A1_at
Gene name	hypothetical protein LOC100193868 /// hypothetical protein LOC100277309
Homology with Arabidopsis	Similar to At4g11760: LCR17 (Low-molecular-weight cysteine-rich 17) (HF=4e+0)
Module size	6 genes
NF	0.30
%ile	27.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	94.0	0.96	Zm.6087.1.A1_at	BM382464	hypothetical protein LOC100193868 /// hypothetical protein LOC100277309	-	4e+0	At4g11760	LCR17 (Low-molecular-weight cysteine-rich 17)	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.95	Zm.6085.3.S1_a_at	AI668392	-	-	9e+0	At5g53820	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.96	Zm.6086.2.A1_a_at	AI920680	hypothetical protein LOC100193851	-	2e+1	At5g03740	HD2C (HISTONE DEACETYLASE 2C)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.96	Zm.10332.2.S1_at	BQ619505	-	-	2e+0	At3g28990	unknown protein	O.I.	H.G.	S.X.	Please select
0.11	5.3	0.96	ZmAffx.644.1.S1_at	AI715072	-	-	1e+1	At5g10695	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	4.6	0.96	Zm.14951.1.A1_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.8	98.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.2	98.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.4	98.3	GSM162264	Mutant 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
9.4	98.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4	98.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4	98.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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