| Gene ID | Zm.6026.1.S1_at |
| Gene name | hypothetical protein LOC100194158 |
| Homology with Arabidopsis | Similar to At3g07100: protein transport protein Sec24, putative (HF=7e-21) |
| Module size | 6 genes |
| NF | 0.18 |
| %ile | 12.6 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 85.8 | 0.99 | Zm.6026.1.S1_at | CA405322 | hypothetical protein LOC100194158 | - | 7e-21 | At3g07100 | protein transport protein Sec24, putative | O.I. | H.G. | S.X. | |
| 0.60 | 77.8 | 0.99 | Zm.1090.4.A1_at | BQ547886 | - | - | 2e+0 | At4g17585 | unknown protein | O.I. | H.G. | S.X. | |
| 0.36 | 41.3 | 0.99 | Zm.17525.1.S1_at | AY639018.1 | sucrose transport protein 4 | - | 3e-13 | At1g09960 | SUT4 (SUCROSE TRANSPORTER 4) | O.I. | H.G. | S.X. | |
| 0.11 | 5.3 | 0.99 | Zm.4131.1.A1_at | AI855072 | - | - | 1e+0 | At4g20325 | unknown protein | O.I. | H.G. | S.X. | |
| 0.11 | 5.3 | 0.99 | Zm.13322.1.A1_at | BM895136 | - | - | 1e+0 | At1g52855 | unknown protein | O.I. | H.G. | S.X. | |
| 0.07 | 2.9 | 0.99 | Zm.4402.1.A1_at | AW091394 | hypothetical protein LOC100193028 | - | 1e-3 | At5g21160 | La domain-containing protein / proline-rich family protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 14.4 | 98.9 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.2 | 98.5 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.1 | 98.5 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.8 | 98.5 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.7 | 98.5 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.1 | 98.4 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.9 | 98.3 | GSM253282 | ZM_8d_SG200_3Alu_III | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 9.4 | 98.3 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.4 | 98.1 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.6 | 97.9 | GSM253281 | ZM_8d_SG200_3Alu_II | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 98.1 | Contig4175_at | At3g07100 | - | - | 1e-19 | At3g07100 | protein transport protein Sec24, putative | O.I. | H.G. | S.X. | |
| 0.80 | 92.5 | Contig4760_s_at | At3g07100 | - | - | 1e+0 | At4g38700 | disease resistance-responsive family protein | O.I. | H.G. | S.X. | |
| 0.73 | 88.7 | Contig5297_at | At3g07100 | - | - | 4e-16 | At1g64550 | ATGCN3 | O.I. | H.G. | S.X. | |
| 0.71 | 87.1 | Contig11464_at | At3g07100 | - | - | 6e-20 | At1g55740 | AtSIP1 (Arabidopsis thaliana seed imbibition 1) | O.I. | H.G. | S.X. | |
| 0.67 | 84.7 | Contig5117_at | At3g07100 | - | - | 8e-2 | At5g60500 | undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein | O.I. | H.G. | S.X. | |
| 0.61 | 78.7 | Contig6995_at | At3g07100 | - | - | 2e-8 | At5g57270 | unknown protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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