Co-expression analysis

Gene ID Zm.5976.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g40080: 60S ribosomal protein-related (HF=3e+0)
Module size 7 genes
NF 0.67
%ile 89.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4759.90.98Zm.5976.2.S1_atBG265782--3e+0At5g4008060S ribosomal protein-relatedO.I.H.G.S.X.
0.7389.90.98Zm.18446.1.A1_atCO518758--3e-2At1g29800phosphoinositide binding / zinc ion bindingO.I.H.G.S.X.
0.7389.90.98Zm.18416.1.A1_atCO524449hypothetical protein LOC100193203-3e-1At3g27900unknown proteinO.I.H.G.S.X.
0.6785.80.98Zm.3204.1.S1_x_atBM953397hypothetical protein LOC100278241-3e-1At1g70250receptor serine/threonine kinase, putativeO.I.H.G.S.X.
0.6785.80.98Zm.6569.9.A1_atAW09144740S ribosomal protein S15-6e-37At5g0951040S ribosomal protein S15 (RPS15D)O.I.H.G.S.X.
0.6077.80.98Zm.4805.1.A1_atCD441355heat shock protein 70 kDa-0At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.5571.60.98Zm.8751.1.A1_atBM348137--1e+0At3g05700-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.698.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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