Co-expression analysis

Gene ID Zm.5962.1.S1_at
Gene name glyoxalase I
Homology with ArabidopsisSimilar to At1g11840: ATGLX1 (GLYOXALASE I HOMOLOG) (HF=1e-17)
Module size 6 genes
NF 0.78
%ile 97.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.98Zm.5962.1.S1_atAY241545.1glyoxalase I-1e-17At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)O.I.H.G.S.X.
0.9199.00.98Zm.3350.2.A1_atCA400679U6 snRNA-associated Sm-like protein LSm4-7e-34At5g27720emb1644 (embryo defective 1644)O.I.H.G.S.X.
0.8395.60.97Zm.13188.3.S1_x_atBM076074hypothetical protein LOC100193240-8e-6At2g37270ATRPS5B (RIBOSOMAL PROTEIN 5B)O.I.H.G.S.X.
0.7389.90.98Zm.6822.2.S1_a_atCO518852receptor expression-enhancing protein 3-3e-2At5g42560abscisic acid-responsive HVA22 family proteinO.I.H.G.S.X.
0.5976.10.97Zm.4811.1.A1_x_atCF624047UDP-N-acetylglucosamine pyrophosphorylase-6e-5At2g35020UTP--glucose-1-phosphate uridylyltransferase family proteinO.I.H.G.S.X.
0.5674.40.98Zm.12898.1.A1_atCA401243hypothetical protein LOC100274425-8e+0At3g25950-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.998.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.291.3GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os08g0191700, orthologous to the query gene, Zm.5962.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6583.8Os08g0191700At1g11840-Glyoxalase I family protein2e-13At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)O.I.H.G.S.X.
0.9097.1Os08g0126300At1g11840-Glyceraldehyde-3-phosphate dehydrogenase(Fragment)6e-23At1g13440GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2)O.I.H.G.S.X.
0.8996.9Os02g0121300At1g11840-Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)(PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-bindingprotein)9e-12At4g38740ROC1 (ROTAMASE CYP 1)O.I.H.G.S.X.
0.8796.6Os01g0147900At1g11840-Triosephosphate isomerase, cytosolic (EC 5.3.1.1)(TIM) (Triose- phosphate isomerase)1e-23At3g55440TPI (TRIOSEPHOSPHATE ISOMERASE)O.I.H.G.S.X.
0.8596.1Os03g0670700At1g11840-Glycine-rich RNA-binding protein GRP1A2e-6At4g39260GR-RBP8O.I.H.G.S.X.
0.8395.8Os02g0161900At1g11840-Ubiquitin0At4g05320UBQ10 (POLYUBIQUITIN 10)O.I.H.G.S.X.
0.7391.1Os06g0130900At1g11840-Histone H3.31e-3At4g40030histone H3.2O.I.H.G.S.X.
0.6887.5Os08g0366100At1g11840-EDF-1 protein (HMBF1alpha) (Endothelialdifferentiation-related factor 1, isoform alpha)(Fragment)6e-11At2g42680MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A)O.I.H.G.S.X.
0.6787.2Os06g0681400At1g11840-Polyubiquitin1e-160At4g05320UBQ10 (POLYUBIQUITIN 10)O.I.H.G.S.X.
0.6787.2Os05g0489600At1g11840-NTGB1 (Fragment)1e-73At1g10630ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F)O.I.H.G.S.X.
0.6181.2Os11g0425600At1g11840-Four F5 protein family protein5e+0At5g42040RPN12b (Regulatory Particle Non-ATPase 12b)O.I.H.G.S.X.
0.5471.9Os06g0152100At1g11840-Profilin 28e-15At2g19760PRF1 (PROFILIN 1)O.I.H.G.S.X.
0.5168.7Os03g0177500At1g11840-EF-1 alpha0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.4762.3Os11g0660500At1g11840-Translationally controlled tumor protein familyprotein2e-13At3g16640TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage