Co-expression analysis

Gene ID Zm.5914.1.A1_at
Gene name nac4 protein
Homology with ArabidopsisSimilar to At3g04060: anac046 (Arabidopsis NAC domain containing protein 46) (HF=4e-12)
Module size 10 genes
NF 0.21
%ile 15.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.30.99Zm.5914.1.A1_atCA402103nac4 protein-4e-12At3g04060anac046 (Arabidopsis NAC domain containing protein 46)O.I.H.G.S.X.
0.2928.10.99ZmAffx.872.1.A1_atAI770770Hypothetical protein LOC100193843-1e+1At5g37475translation initiation factor-relatedO.I.H.G.S.X.
0.2724.60.99Zm.13927.1.A1_atU41079.1--1e+0At3g47295unknown proteinO.I.H.G.S.X.
0.2216.90.99Zm.6399.1.A1_atCF630978hypothetical protein LOC100277208-9e-2At2g38646unknown proteinO.I.H.G.S.X.
0.2115.50.99Zm.3893.1.A1_atCF623496--2e-1At2g32160-O.I.H.G.S.X.
0.2115.50.99Zm.1115.1.A1_atAY104250.1--1e+0At4g00210LBD31 (LOB DOMAIN-CONTAINING PROTEIN 31)O.I.H.G.S.X.
0.2014.20.99Zm.17199.1.A1_atCK370582hypothetical protein LOC100191930-2e-10At3g27960kinesin light chain-relatedO.I.H.G.S.X.
0.147.70.99ZmAffx.745.1.A1_atAI745776--3e+0At5g17650glycine/proline-rich proteinO.I.H.G.S.X.
0.147.70.99Zm.17344.1.S1_atCK370586--4e+0At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeO.I.H.G.S.X.
0.115.30.99Zm.943.1.A1_atBF729547CID11-1e+0At5g42240scpl42 (serine carboxypeptidase-like 42)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.798.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM205367Mo17xB73 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
9.498.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320439protocol: mRNA - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM205375Mo17xB73 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
7.097.7GSM205373Mo17 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
6.297.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.097.3GSM205365Mo17 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
5.997.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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