Co-expression analysis

Gene ID	Zm.5881.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At2g16640: TOC132 (MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132) (HF=9e-8)
Module size	12 genes
NF	0.26
%ile	21.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.70	87.0	0.98	Zm.5881.1.A1_at	CA401815	-	-	9e-8	At2g16640	TOC132 (MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132)	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.99	Zm.4852.1.A1_at	CO527893	hypothetical protein LOC100192969	-	3e-2	At4g39000	AtGH9B17 (Arabidopsis thaliana glycosyl hydrolase 9B17)	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.98	Zm.14325.1.S1_at	AY104177.1	hypothetical protein LOC100279850	-	2e-1	At3g12550	XH/XS domain-containing protein / XS zinc finger domain-containing protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.99	ZmAffx.995.1.S1_at	AI855362	Sister of ramosa 3	-	2e-6	At1g22210	trehalose-6-phosphate phosphatase, putative	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.99	Zm.17844.1.A1_at	BG873843	hypothetical protein LOC100273210	-	1e+0	At4g39150	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.98	Zm.18135.1.A1_at	CN845300	-	-	4e+0	Atmg01410	-	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.99	Zm.9008.1.A1_at	AF371265.1	delta zein structural18 /// prolamin /// prolamin	-	2e+0	At5g61680	pectinesterase family protein	O.I.	H.G.	S.X.	Please select
0.20	14.2	0.99	Zm.18298.1.A1_at	CO531061	senescence-associated protein	-	1e+0	At3g54130	josephin family protein	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.99	Zm.9956.1.A1_at	BM076038	-	-	1e+1	At4g30993	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.99	Zm.2267.1.S1_at	AY105804.1	-	-	7e-7	At1g79860	ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)	O.I.	H.G.	S.X.	Please select
0.16	9.4	0.99	Zm.16311.2.S1_at	BE575048	hypothetical protein LOC100192600	-	5e-93	At5g02960	40S ribosomal protein S23 (RPS23B)	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.99	Zm.5337.1.A1_at	BM079465	-	-	1e+0	At5g11440	CID5	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.7	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.1	98.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.6	97.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.5	92.6	GSM320460	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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