Co-expression analysis

Gene ID Zm.5801.1.A1_at
Gene name hypothetical protein LOC100275802
Homology with ArabidopsisSimilar to At5g12470: unknown protein (HF=6e-3)
Module size 6 genes
NF 0.50
%ile 64.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.80.88Zm.5801.1.A1_atAY111239.1hypothetical protein LOC100275802-6e-3At5g12470unknown proteinO.I.H.G.S.X.
0.7792.10.87Zm.16065.2.A1_s_atBM080549Histone H2B.3-8e-15At1g07790HTB1O.I.H.G.S.X.
0.6077.80.85Zm.5146.2.S1_atAI586869Hypothetical protein LOC100194286-6e-22At1g02560CLPP5 (NUCLEAR ENCODED CLP PROTEASE 5)O.I.H.G.S.X.
0.5065.70.89Zm.11652.1.A1_atBM379695hypothetical protein LOC100194255-6e-3At4g02690glutamate bindingO.I.H.G.S.X.
0.4658.40.86Zm.13558.1.A1_atBQ163517--1e-3At1g26340CB5-A (CYTOCHROME B5 ISOFORM A)O.I.H.G.S.X.
0.2115.50.85Zm.3078.1.S1_atAW453293hypothetical protein LOC100192566-2e+0At4g28181unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.398.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
1.888.9GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.19826.1.A1_at, orthologous to the query gene, Zm.5801.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8492.6GmaAffx.19826.1.A1_atAt5g12470--4e+0At5g45940atnudt11 (Arabidopsis thaliana Nudix hydrolase homolog 11)O.I.H.G.S.X.
0.8993.5GmaAffx.86740.1.S1_atAt5g12470--6e-3At2g37940-O.I.H.G.S.X.
0.8592.8GmaAffx.14179.1.S1_atAt5g12470--8e-1At4g39260GR-RBP8O.I.H.G.S.X.
0.8492.6GmaAffx.88122.1.S1_atAt5g12470--3e-14At3g12620protein phosphatase 2C family protein / PP2C family proteinO.I.H.G.S.X.
0.8191.7Gma.7596.1.S1_atAt5g12470--3e-6At2g46210delta-8 sphingolipid desaturase, putativeO.I.H.G.S.X.
0.8191.7Gma.18083.1.S1_atAt5g12470--2e-9At5g62460zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.8191.7Gma.7768.2.S1_atAt5g12470--1e-19At2g37940-O.I.H.G.S.X.
0.8091.5GmaAffx.902.1.S1_s_atAt5g12470--1e-4At5g10520RBK1 (Rop Binding protein Kinases 1)O.I.H.G.S.X.
0.7890.6Gma.18042.1.S1_atAt5g12470--4e-1At4g00315F-box family proteinO.I.H.G.S.X.
0.7589.5GmaAffx.81976.1.S1_atAt5g12470--1e-13At5g51290ceramide kinase-relatedO.I.H.G.S.X.
0.7388.9Gma.4287.1.S1_atAt5g12470--2e-15At1g23330unknown proteinO.I.H.G.S.X.
0.7288.1GmaAffx.33415.1.A1_atAt5g12470--3e-1At5g54145unknown proteinO.I.H.G.S.X.
0.7087.1GmaAffx.73287.1.S1_atAt5g12470--9e-1At1g70440SRO3 (SIMILAR TO RCD ONE 3)O.I.H.G.S.X.
0.6986.8Gma.3126.2.S1_x_atAt5g12470--5e-1At3g17490F-box family proteinO.I.H.G.S.X.
0.6886.4Gma.3983.1.A1_atAt5g12470--7e-1At3g22750protein kinase, putativeO.I.H.G.S.X.
0.6583.8Gma.12511.1.A1_atAt5g12470--4e-10At1g31300-O.I.H.G.S.X.
0.6583.8GmaAffx.73263.1.S1_atAt5g12470--9e-5At3g61160shaggy-related protein kinase beta / ASK-beta (ASK2)O.I.H.G.S.X.
0.6483.4Gma.10334.2.S1_atAt5g12470--9e-4At3g52290IQD3 (IQ-domain 3)O.I.H.G.S.X.
0.6483.4Gma.3126.2.S1_atAt5g12470--5e-1At3g17490F-box family proteinO.I.H.G.S.X.
0.6382.9Gma.3552.1.S1_atAt5g12470--1e-32At5g45550mob1/phocein family proteinO.I.H.G.S.X.
0.6382.9GmaAffx.23963.1.S1_atAt5g12470--3e+0At3g42310unknown proteinO.I.H.G.S.X.
0.6181.8GmaAffx.39172.1.S1_atAt5g12470--2e-5At1g12340-O.I.H.G.S.X.
0.6080.7GmaAffx.83517.1.A1_atAt5g12470--1e+0At3g17240mtLPD2 (LIPOAMIDE DEHYDROGENASE 2)O.I.H.G.S.X.
0.6080.7GmaAffx.82262.1.S1_atAt5g12470--3e-28At3g51770ETO1 (ETHYLENE OVERPRODUCER 1)O.I.H.G.S.X.
0.5979.5Gma.12856.1.A1_atAt5g12470--8e-1At3g02940MYB107 (myb domain protein 107)O.I.H.G.S.X.
0.5979.5GmaAffx.26469.1.S1_atAt5g12470--4e-9At5g56750Ndr family proteinO.I.H.G.S.X.
0.5979.5Gma.4785.1.S1_atAt5g12470--6e-12At4g26180mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.5878.8Gma.17354.1.S1_atAt5g12470--3e+0At1g75180unknown proteinO.I.H.G.S.X.
0.5474.8Gma.9548.1.S1_atAt5g12470--4e-23At4g00720ATSK32 (SHAGGY-LIKE PROTEIN KINASE 32)O.I.H.G.S.X.
0.4360.6Gma.7768.1.A1_s_atAt5g12470--2e-8At3g54020phosphatidic acid phosphatase-related / PAP2-relatedO.I.H.G.S.X.
0.4259.3Gma.14065.1.A1_atAt5g12470--4e-35At5g64500membrane protein-relatedO.I.H.G.S.X.
0.3548.6GmaAffx.50295.1.S1_atAt5g12470--3e+0At1g54400-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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