Co-expression analysis

Gene ID Zm.5789.13.A1_a_at
Gene name hypothetical protein LOC100192516
Homology with ArabidopsisSimilar to At1g43170: ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1) (HF=8e-7)
Module size 14 genes
NF 0.39
%ile 43.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7087.00.96Zm.5789.13.A1_a_atAI670670hypothetical protein LOC100192516-8e-7At1g43170ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1)O.I.H.G.S.X.
0.6179.50.97Zm.15843.1.S1_atCD988927hypothetical protein LOC100275209-9e-1At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)O.I.H.G.S.X.
0.6077.80.98Zm.3044.1.S1_atAW360661--2e-10At1g27900RNA helicase, putativeO.I.H.G.S.X.
0.5065.70.97Zm.7146.1.A1_atCF00389930S ribosomal protein S17 /// hypothetical protein LOC100276656-3e-20At1g79850RPS17 (RIBOSOMAL PROTEIN S17)O.I.H.G.S.X.
0.5065.70.98Zm.3044.2.S1_a_atAI881563--8e-1At1g59835unknown proteinO.I.H.G.S.X.
0.4861.30.98Zm.1423.1.A1_atCF047935RING zinc finger protein-like-2e-7At1g69330zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4759.90.97Zm.5687.1.A1_atAI629947--5e-4At1g30270CIPK23 (CBL-INTERACTING PROTEIN KINASE 23)O.I.H.G.S.X.
0.4455.70.98Zm.3044.2.A1_atAI881563--8e-1At1g59835unknown proteinO.I.H.G.S.X.
0.4048.50.98Zm.6264.1.S1_atBG266134Hypothetical protein LOC100191870-4e-34At1g70300KUP6O.I.H.G.S.X.
0.3233.40.96Zm.888.1.S1_atCK828040hypothetical protein LOC100216750-1e-7At1g08880H2AXAO.I.H.G.S.X.
0.2928.10.98Zm.16513.1.A1_atCF634462hypothetical protein LOC100273404-0At5g09810ACT7 (ACTIN 7)O.I.H.G.S.X.
0.2419.80.97Zm.3379.1.A1_atBM075631hypothetical protein LOC100272941-1e+0At3g59250F-box family proteinO.I.H.G.S.X.
0.2419.80.96Zm.6190.1.A1_atCD447053--9e-8At2g20490NOP10O.I.H.G.S.X.
0.158.60.96Zm.4530.1.A1_atCK827450hypothetical protein LOC100276667-1e-1At5g33898unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.793.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM258535Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 3GSE10243Profiling expression changes caused by a segmental aneuploid in maizeLink to GEO
2.190.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.090.2GSM258537Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 4GSE10243Profiling expression changes caused by a segmental aneuploid in maizeLink to GEO
2.090.2GSM258531Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 1GSE10243Profiling expression changes caused by a segmental aneuploid in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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