Co-expression analysis

Gene ID Zm.5788.1.A1_at
Gene name hypothetical protein LOC100280278
Homology with ArabidopsisSimilar to At5g55190: RAN3 (RAN GTPASE 3) (HF=5e+0)
Module size 7 genes
NF 0.44
%ile 51.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.97Zm.5788.1.A1_atAI600957hypothetical protein LOC100280278-5e+0At5g55190RAN3 (RAN GTPASE 3)O.I.H.G.S.X.
0.5065.70.98Zm.7012.7.A1_a_atAI881466ribosomal protein S8-1e-55At5g5924040S ribosomal protein S8 (RPS8B)O.I.H.G.S.X.
0.5065.70.98Zm.5539.1.A1_atBG842565hypothetical protein LOC100276652-5e+0At5g03090unknown proteinO.I.H.G.S.X.
0.4048.50.98Zm.6558.1.S1_atAF073329.1eukaryotic initiation factor3-1e-10At4g11420EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A)O.I.H.G.S.X.
0.4048.50.98Zm.6560.1.S1_atZ29518.1phospholipid synthesis1-8e-35At3g57650LPAT2O.I.H.G.S.X.
0.3437.20.97Zm.261.1.S1_atCD996491translocon at outer membrane of chloroplast34-1e-2At5g05000TOC34 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34)O.I.H.G.S.X.
0.2724.60.97Zm.7644.2.S1_x_atBM341428--4e+0At5g23760heavy-metal-associated domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.299.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.898.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.998.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.998.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM206307Lower pulvinus 5 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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