Co-expression analysis

Gene ID Zm.5723.1.A1_at
Gene name fiber protein Fb2
Homology with ArabidopsisSimilar to At4g33740: unknown protein (HF=9e-3)
Module size 6 genes
NF 0.55
%ile 73.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.99Zm.5723.1.A1_atBM079835fiber protein Fb2-9e-3At4g33740unknown proteinO.I.H.G.S.X.
0.7389.90.99Zm.3044.2.S1_a_atAI881563--8e-1At1g59835unknown proteinO.I.H.G.S.X.
0.7389.90.99Zm.3044.2.A1_atAI881563--8e-1At1g59835unknown proteinO.I.H.G.S.X.
0.6785.80.99Zm.15846.1.A1_s_atAA979796--1e-4At1g52360coatomer protein complex, subunit beta 2 (beta prime), putativeO.I.H.G.S.X.
0.6785.80.99Zm.15845.1.S1_atCF244242hypothetical protein LOC100216966-5e+0At3g10850GLY2O.I.H.G.S.X.
0.2622.70.98Zm.16537.1.S1_atAY103617.140S ribosomal protein SA-4e-70At1g72370P40O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.998.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
4.596.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM202292B73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
4.296.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1611664_at, orthologous to the query gene, Zm.5723.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9499.31611664_atAt4g33740hypothetical protein LOC100251070-4e-1At5g63740zinc finger protein-relatedO.I.H.G.S.X.
0.3345.71611458_atAt4g33740hypothetical protein LOC100243644-2e-18At2g35530bZIP transcription factor family proteinO.I.H.G.S.X.
0.2530.51620494_atAt4g33740--1e+0At5g55190RAN3 (RAN GTPASE 3)O.I.H.G.S.X.
0.2327.51610400_atAt4g33740hypothetical protein LOC100247229-1e+0At5g48080-O.I.H.G.S.X.
0.2225.61612660_atAt4g33740hypothetical protein LOC100244096-1e-39At1g20960emb1507 (embryo defective 1507)O.I.H.G.S.X.
0.2124.01615142_atAt4g33740hypothetical protein LOC100266152-6e-2At1g24010-O.I.H.G.S.X.
0.1819.41617034_atAt4g33740hypothetical protein LOC100248287-1e+0At5g09480hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.1616.71606430_atAt4g33740hypothetical protein LOC100251243-1e-33At1g79000HAC1 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1)O.I.H.G.S.X.
0.1111.31619386_atAt4g33740hypothetical protein LOC100256181-5e-1At3g11230yippee family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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