| Gene ID | Zm.5723.1.A1_at |
| Gene name | fiber protein Fb2 |
| Homology with Arabidopsis | Similar to At4g33740: unknown protein (HF=9e-3) |
| Module size | 6 genes |
| NF | 0.55 |
| %ile | 73.3 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.80 | 94.0 | 0.99 | Zm.5723.1.A1_at | BM079835 | fiber protein Fb2 | - | 9e-3 | At4g33740 | unknown protein | O.I. | H.G. | S.X. | |
| 0.73 | 89.9 | 0.99 | Zm.3044.2.S1_a_at | AI881563 | - | - | 8e-1 | At1g59835 | unknown protein | O.I. | H.G. | S.X. | |
| 0.73 | 89.9 | 0.99 | Zm.3044.2.A1_at | AI881563 | - | - | 8e-1 | At1g59835 | unknown protein | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.99 | Zm.15846.1.A1_s_at | AA979796 | - | - | 1e-4 | At1g52360 | coatomer protein complex, subunit beta 2 (beta prime), putative | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.99 | Zm.15845.1.S1_at | CF244242 | hypothetical protein LOC100216966 | - | 5e+0 | At3g10850 | GLY2 | O.I. | H.G. | S.X. | |
| 0.26 | 22.7 | 0.98 | Zm.16537.1.S1_at | AY103617.1 | 40S ribosomal protein SA | - | 4e-70 | At1g72370 | P40 | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 10.9 | 98.5 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.6 | 98.4 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.8 | 98.3 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.4 | 97.8 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.9 | 97.7 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.5 | 97.1 | GSM202298 | B73 immature ear tissue, biological replicate 2 | GSE8176 | Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data | |
| 4.5 | 96.3 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.3 | 96.1 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.3 | 96.1 | GSM202292 | B73 immature ear tissue, biological replicate 1 | GSE8176 | Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data | |
| 4.2 | 96.0 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.73 | 91.1 | Os12g0556100 | At4g33740 | - | Drought induced 19 family protein | 4e+0 | At2g46500 | phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | Os03g0601100 | At4g33740 | - | Cyclin-like F-box domain containing protein | 4e+0 | At4g15735 | SCRL10 (SCR-Like 10) | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | Os09g0499600 | At4g33740 | - | - | 4e-1 | At5g45870 | Bet v I allergen family protein | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os04g0534300 | At4g33740 | - | Ubiquitin interacting motif domain containingprotein | 6e-1 | At3g50550 | unknown protein | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | Os12g0193100 | At4g33740 | - | Subtilisin inhibitor I (ASI-I) [Contains:Subtilisin inhibitor II (ASI-II)] | 6e-1 | At3g61840 | unknown protein | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | Os03g0253500 | At4g33740 | - | D111/G-patch domain containing protein | 4e-2 | At3g18360 | VQ motif-containing protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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