Co-expression analysis

Gene ID Zm.5718.1.A1_at
Gene name hypothetical protein LOC100278767
Homology with ArabidopsisSimilar to At5g66005: Expressed protein (HF=6e+0)
Module size 13 genes
NF 0.33
%ile 32.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.10.95Zm.5718.1.A1_atBM336876hypothetical protein LOC100278767-6e+0At5g66005Expressed proteinO.I.H.G.S.X.
0.4455.70.97Zm.19107.1.A1_atBM332383hypothetical protein LOC100272386-8e-4At1g15030-O.I.H.G.S.X.
0.4251.30.96Zm.13627.1.A1_atAY107420.1hypothetical protein LOC100275707-3e-1At2g22200AP2 domain-containing transcription factorO.I.H.G.S.X.
0.4251.30.97Zm.7570.1.A1_atBM078988flavonol synthase-like protein-2e-2At3g502102-oxoacid-dependent oxidase, putativeO.I.H.G.S.X.
0.3742.30.97Zm.526.1.S1_atAF242320.1hypothetical LOC541826-1e-3At5g14620DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2)O.I.H.G.S.X.
0.3641.30.97Zm.3286.1.A1_atBG265986--2e+0At4g32551LUG (LEUNIG)O.I.H.G.S.X.
0.3641.30.96Zm.13621.1.A1_atCF632782hypothetical protein LOC100191615-4e-10At2g17350unknown proteinO.I.H.G.S.X.
0.3233.40.97Zm.1423.1.A1_atCF047935RING zinc finger protein-like-2e-7At1g69330zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3029.80.97Zm.13815.1.S1_atCF057002Grx_C2.2 - glutaredoxin subgroup I-7e-3At5g63030glutaredoxin, putativeO.I.H.G.S.X.
0.2928.10.96Zm.6264.1.S1_atBG266134Hypothetical protein LOC100191870-4e-34At1g70300KUP6O.I.H.G.S.X.
0.2724.60.97Zm.2652.1.A1_atAW066710--1e+1At5g18020auxin-responsive protein, putativeO.I.H.G.S.X.
0.2115.50.96Zm.8152.1.S1_atBM073102hypothetical protein LOC100192746-1e-81At4g40040histone H3.2O.I.H.G.S.X.
0.2014.20.97Zm.4560.2.S1_atAY106577.1--2e-11At3g59350serine/threonine protein kinase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.397.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.097.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM206330Lower pulvinus 2 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
4.896.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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