Co-expression analysis

Gene ID	Zm.5696.1.A1_at
Gene name	hypothetical protein LOC100274101
Homology with Arabidopsis	Similar to At5g45430: protein kinase, putative (HF=2e-8)
Module size	6 genes
NF	0.60
%ile	81.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	94.0	0.99	Zm.5696.1.A1_at	AW067308	hypothetical protein LOC100274101	-	2e-8	At5g45430	protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.99	ZmAffx.477.1.S1_at	AI677582	-	-	8e-1	At5g51860	MADS-box protein (AGL72)	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.99	Zm.4633.1.A1_at	AI737444	-	-	3e+0	At4g22740	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.99	Zm.7677.1.A1_at	BM331802	metal ion binding protein	-	1e+0	At2g35760	integral membrane family protein	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.99	Zm.17391.1.A1_at	BE056848	-	-	1e-42	At3g11510	40S ribosomal protein S14 (RPS14B)	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.99	Zm.10612.1.A1_at	BM073146	-	-	1e+0	At3g29152	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.8	96.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.7	96.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.4	96.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM202306	Mo17xB73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.3	96.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.0	95.8	GSM202295	Mo17xB73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.0	95.8	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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