Co-expression analysis

Gene ID Zm.5684.1.A1_at
Gene name hypothetical protein LOC100273852
Homology with ArabidopsisSimilar to At5g17440: LUC7 N_terminus domain-containing protein (HF=5e-24)
Module size 7 genes
NF 0.26
%ile 21.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4658.40.93Zm.5684.1.A1_atBM334571hypothetical protein LOC100273852-5e-24At5g17440LUC7 N_terminus domain-containing proteinO.I.H.G.S.X.
0.3538.90.96Zm.3756.1.A1_atBE025409--8e-3At2g24520AHA5 (Arabidopsis H(+)-ATPase 5)O.I.H.G.S.X.
0.2724.60.96Zm.12227.1.S1_atAY104350.1heat shock cognate 70 kDa protein 2-2e-53At3g09440heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3)O.I.H.G.S.X.
0.2521.30.95Zm.9056.1.A1_atBM334642--1e+0At4g26055unknown proteinO.I.H.G.S.X.
0.1710.60.96Zm.4810.1.A1_atAI745785--5e+0At3g60390HAT3 (HOMEOBOX-LEUCINE ZIPPER PROTEIN 3)O.I.H.G.S.X.
0.1710.60.96Zm.481.1.S1_atAF227632.1mismatch binding protein Mus3-2e-8At4g02070MSH6 (MUTS HOMOLOG 6)O.I.H.G.S.X.
0.169.40.95Zm.7768.1.A1_atBG836144--4e-3At5g23950C2 domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.798.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.598.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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