Co-expression analysis

Gene ID	Zm.5557.1.A1_at
Gene name	hypothetical protein LOC100279552
Homology with Arabidopsis	Similar to At5g24890: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.08
%ile	4.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.98	Zm.5557.1.A1_at	CD573414	hypothetical protein LOC100279552	-	1e+0	At5g24890	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.99	Zm.6121.1.S1_at	CD439726	-	-	4e-1	At5g54540	-	O.I.	H.G.	S.X.	Please select
0.20	14.2	0.99	Zm.2368.1.S1_at	AY109497.1	plastidic phosphate translocator-like protein1	-	4e-21	At4g32390	phosphate translocator-related	O.I.	H.G.	S.X.	Please select
0.18	11.6	0.99	Zm.6207.3.A1_x_at	CA403318	60S ribosomal protein L15	-	3e-26	At4g17390	60S ribosomal protein L15 (RPL15B)	O.I.	H.G.	S.X.	Please select
0.09	4.0	0.99	Zm.2910.1.S1_a_at	CK145276	hypothetical protein LOC100217030 /// hypothetical protein LOC100277437	-	8e+0	At5g02920	ubiquitin-protein ligase	O.I.	H.G.	S.X.	Please select
0.02	0.7	0.98	Zm.17257.1.A1_at	CF624421	hypothetical protein LOC100273469	-	5e-13	At2g41540	GPDHC1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
22.7	99.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.3	99.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.1	99.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.3	99.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.9	99.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.0	99.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.5	98.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1	98.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.3	96.9	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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