| Gene ID | Zm.5542.1.S1_at |
| Gene name | Hypothetical protein LOC100193112 |
| Homology with Arabidopsis | Similar to At3g15140: exonuclease family protein (HF=7e-4) |
| Module size | 6 genes |
| NF | 0.57 |
| %ile | 76.4 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.50 | 65.7 | 0.97 | Zm.5542.1.S1_at | CO518213 | Hypothetical protein LOC100193112 | - | 7e-4 | At3g15140 | exonuclease family protein | O.I. | H.G. | S.X. | |
| 0.71 | 88.2 | 0.96 | Zm.3832.1.S1_at | AY112267.1 | actin-depolymerizing factor | - | 1e-13 | At4g25590 | ADF7 (actin depolymerizing factor 7) | O.I. | H.G. | S.X. | |
| 0.57 | 75.1 | 0.96 | Zm.3058.1.A1_at | BM338821 | glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform | - | 6e-36 | At3g27300 | G6PD5 (glucose-6-phosphate dehydrogenase 5) | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.97 | Zm.6743.3.S1_at | AY104585.1 | hypothetical protein LOC100216801 | - | 2e-10 | At3g02420 | unknown protein | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.97 | Zm.9017.1.A1_at | BM338660 | Hypothetical protein LOC100193460 | - | 2e+0 | At1g64290 | F-box protein-related | O.I. | H.G. | S.X. | |
| 0.44 | 55.7 | 0.96 | Zm.4613.1.A1_at | CK826972 | - | - | 5e-1 | At1g73770 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 20.5 | 99.3 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 17.8 | 99.1 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 15.6 | 99.0 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 14.8 | 98.9 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 14.4 | 98.9 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.2 | 98.6 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.3 | 98.4 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.2 | 98.2 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.0 | 98.2 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.3 | 94.7 | GSM320459 | protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 98.9 | Os06g0353400 | At3g15140 | - | Conserved hypothetical protein | 2e+0 | At5g13850 | NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3) | O.I. | H.G. | S.X. | |
| 0.57 | 77.0 | Os08g0485600 | At3g15140 | - | Zn-finger, C2H2 type domain containing protein | 2e+0 | At3g60420 | - | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os12g0225300 | At3g15140 | - | FAR1 domain containing protein | 7e-3 | At5g63740 | zinc finger protein-related | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os05g0587400 | At3g15140 | - | contains InterPro domain(s): IPR010989 | 2e-7 | At4g27620 | unknown protein | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os12g0109900 | At3g15140 | - | Double-stranded RNA binding domain containingprotein | 6e-2 | At2g28380 | DRB2 (DSRNA-BINDING PROTEIN 2) | O.I. | H.G. | S.X. | |
| 0.43 | 55.4 | Os05g0583500 | At3g15140 | - | PX-associated domain containing protein | 4e+0 | At4g00355 | unknown protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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