Co-expression analysis

Gene ID Zm.5515.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g01580: unknown protein (HF=3e+0)
Module size 16 genes
NF 0.31
%ile 29.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7490.30.94Zm.5515.1.A1_atCF631927--3e+0At2g01580unknown proteinO.I.H.G.S.X.
0.4455.70.96Zm.18544.1.A1_atCK826617--1e-1At4g24900unknown proteinO.I.H.G.S.X.
0.3844.20.96Zm.4984.1.S1_atAY108203.1diacylglycerol kinase-2e-11At4g30340ATDGK7 (Diacylglycerol kinase 7)O.I.H.G.S.X.
0.3742.30.97Zm.4703.1.A1_atBM079272hypothetical protein LOC100279234-2e+1At5g41860unknown proteinO.I.H.G.S.X.
0.3336.00.96Zm.17751.1.S1_atCK371154--1e+0At1g14210ribonuclease T2 family proteinO.I.H.G.S.X.
0.3336.00.96Zm.12667.1.S1_atCA831456hypothetical protein LOC100276149 /// hypothetical protein LOC100278740-1e+0At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)O.I.H.G.S.X.
0.3233.40.97Zm.4049.1.A1_atAI834098hypothetical protein LOC100279705-1e+0At5g14130peroxidase, putativeO.I.H.G.S.X.
0.2724.60.96Zm.15748.1.S1_atCD446789hypothetical protein LOC100280178-4e+0At3g50870MNP (MONOPOLE)O.I.H.G.S.X.
0.2419.80.96Zm.18283.1.A1_atBG841297hypothetical protein LOC100217202 /// hypothetical protein LOC100217213-5e+0At5g49540unknown proteinO.I.H.G.S.X.
0.2419.80.96Zm.13856.1.S1_atAF439727.1formate tetrahyrofolate ligase-9e-58At1g50480THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)O.I.H.G.S.X.
0.2318.60.96Zm.16896.1.A1_s_atBM076061hypothetical protein LOC100280314-5e+0At1g01230ORMDL family proteinO.I.H.G.S.X.
0.2216.90.96Zm.1263.1.A1_atAY108751.1hypothetical protein LOC100274372-1e-7At3g51820G4O.I.H.G.S.X.
0.2216.90.98Zm.3620.1.S1_atAW076176--5e+0At5g28610-O.I.H.G.S.X.
0.2216.90.96Zm.5163.1.S1_atAY108468.1gda-1-7e-20At3g27090-O.I.H.G.S.X.
0.2115.50.97Zm.8865.1.A1_atBM267927hypothetical protein LOC100191271-3e-9At5g35460unknown proteinO.I.H.G.S.X.
0.2115.50.96Zm.15168.1.A1_atBM334462--1e+0At5g43066unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.598.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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