Co-expression analysis

Gene ID Zm.5329.1.A1_at
Gene name hypothetical protein LOC100280090
Homology with ArabidopsisSimilar to At3g43790: ZIFL2 (ZINC INDUCED FACILITATOR-like 2) (HF=2e-5)
Module size 15 genes
NF 0.52
%ile 67.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5469.80.97Zm.5329.1.A1_atAI619268hypothetical protein LOC100280090-2e-5At3g43790ZIFL2 (ZINC INDUCED FACILITATOR-like 2)O.I.H.G.S.X.
0.6886.10.98Zm.14497.9.S1_atBM382119--2e-15At5g59910HTB4O.I.H.G.S.X.
0.6381.10.97Zm.5143.1.A1_atAY107731.1hypothetical protein LOC100276623-1e-1At1g74730unknown proteinO.I.H.G.S.X.
0.6381.10.98Zm.6096.1.A1_atCF636033hypothetical protein LOC100273833-6e-1At4g39170SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeO.I.H.G.S.X.
0.5976.10.98Zm.2806.1.A1_a_atAW067337--6e-1At2g41660MIZ1 (mizu-kussei 1)O.I.H.G.S.X.
0.5674.40.97Zm.4813.1.S1_atCD977978--5e-1At1g35537-O.I.H.G.S.X.
0.5571.60.98Zm.4860.2.A1_atAI770577--3e+0At2g34140Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.4759.90.97Zm.2849.1.S1_atCD219229shaggy-related protein kinase eta-4e-52At1g06390GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1)O.I.H.G.S.X.
0.4759.90.97Zm.18033.1.A1_atBM080835--1e+0At1g11240unknown proteinO.I.H.G.S.X.
0.4251.30.97Zm.796.1.A1_a_atCK370719--3e-9At5g53140protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.4251.30.98Zm.4795.1.A1_atBM074194--8e-2At3g63230unknown proteinO.I.H.G.S.X.
0.4149.70.98Zm.384.1.A1_atAF001635.1physical impedance induced protein2-6e+0At5g03100F-box family proteinO.I.H.G.S.X.
0.4149.70.97Zm.5106.1.A1_atAI600864hypothetical protein LOC100273412-1e-20At4g22330ATCES1O.I.H.G.S.X.
0.4048.50.98ZmAffx.1026.1.A1_atAI881620hypothetical protein LOC100193718-3e+0At5g27570WD-40 repeat family proteinO.I.H.G.S.X.
0.3336.00.98Zm.13016.1.A1_atCA403346hypothetical protein LOC100277160-2e+0At1g22160senescence-associated protein-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.098.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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