| Gene ID | Zm.5289.2.A1_a_at |
| Gene name | hypothetical protein LOC100274172 |
| Homology with Arabidopsis | Similar to At2g33040: ATP synthase gamma chain, mitochondrial (ATPC) (HF=1e-30) |
| Module size | 6 genes |
| NF | 0.41 |
| %ile | 47.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.71 | 88.2 | 0.95 | Zm.5289.2.A1_a_at | AI600945 | hypothetical protein LOC100274172 | - | 1e-30 | At2g33040 | ATP synthase gamma chain, mitochondrial (ATPC) | O.I. | H.G. | S.X. | |
| 0.80 | 94.0 | 0.95 | Zm.12546.2.A1_at | AI770557 | - | - | 3e+0 | At5g56150 | UBC30 (ubiquitin-conjugating enzyme 30) | O.I. | H.G. | S.X. | |
| 0.61 | 79.5 | 0.95 | Zm.19037.1.S1_at | CA404446 | - | - | 1e-30 | At3g50530 | CRK (CDPK-related kinase) | O.I. | H.G. | S.X. | |
| 0.55 | 71.6 | 0.95 | Zm.455.2.A1_at | BM078476 | dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex | - | 2e-13 | At3g13930 | dihydrolipoamide S-acetyltransferase, putative | O.I. | H.G. | S.X. | |
| 0.26 | 22.7 | 0.95 | Zm.17510.1.A1_at | CK144409 | hypothetical protein LOC100217109 | - | 6e-22 | At1g08970 | NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9) | O.I. | H.G. | S.X. | |
| 0.19 | 12.8 | 0.95 | Zm.186.1.S1_at | X71396.1 | Bowman-Birk type wound-induced proteinase inhibitor WIP1 | - | 1e+0 | At1g20000 | TAF11b (TBP-ASSOCIATED FACTOR 11b) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 15.6 | 99.0 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.9 | 98.7 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.3 | 98.5 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.2 | 98.5 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.2 | 98.0 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.1 | 98.0 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.5 | 97.8 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.1 | 97.4 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.9 | 97.3 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 1.6 | 87.4 | GSM320464 | protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.36 | 50.8 | Gma.17344.1.S1_at | At2g33040 | - | - | 7e-41 | At2g33040 | ATP synthase gamma chain, mitochondrial (ATPC) | O.I. | H.G. | S.X. | |
| 0.83 | 92.5 | Gma.732.1.A1_at | At2g33040 | - | - | 4e-7 | At4g07390 | PQ-loop repeat family protein / transmembrane family protein | O.I. | H.G. | S.X. | |
| 0.67 | 86.1 | GmaAffx.92974.1.S1_s_at | At2g33040 | - | - | 8e-2 | At3g17780 | unknown protein | O.I. | H.G. | S.X. | |
| 0.63 | 82.9 | Gma.4035.1.S1_at | At2g33040 | - | - | 1e-38 | At5g11560 | catalytic | O.I. | H.G. | S.X. | |
| 0.61 | 81.8 | Gma.8460.1.S1_at | At2g33040 | acyl-CoA oxidase | - | 7e-39 | At4g16760 | ACX1 (ACYL-COA OXIDASE 1) | O.I. | H.G. | S.X. | |
| 0.48 | 67.7 | Gma.448.2.S1_a_at | At2g33040 | - | - | 3e-21 | At3g60820 | PBF1 | O.I. | H.G. | S.X. | |
| 0.44 | 63.3 | Gma.5368.1.S1_at | At2g33040 | - | - | 2e-30 | At5g05780 | RPN8A (RP NON-ATPASE SUBUNIT 8A) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Hordeum_vulgare |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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