| Gene ID | Zm.5237.1.A1_at |
| Gene name | hypothetical protein LOC100273890 |
| Homology with Arabidopsis | Similar to At1g47260: GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2) (HF=2e-19) |
| Module size | 6 genes |
| NF | 0.46 |
| %ile | 56.1 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.77 | 92.1 | 0.98 | Zm.5237.1.A1_at | AY107290.1 | hypothetical protein LOC100273890 | - | 2e-19 | At1g47260 | GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2) | O.I. | H.G. | S.X. | |
| 0.60 | 77.8 | 0.98 | Zm.487.1.S1_a_at | AF181479.1 | silky1 | - | 8e-3 | At2g22540 | SVP (SHORT VEGETATIVE PHASE) | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.98 | Zm.8376.1.S1_at | BM073880 | hypothetical protein LOC100280303 | - | 4e-1 | At3g44590 | 60S acidic ribosomal protein P2 (RPP2D) | O.I. | H.G. | S.X. | |
| 0.36 | 41.3 | 0.98 | Zm.18047.1.S1_at | CF623859 | hypothetical protein LOC100275732 | - | 2e+0 | At5g42250 | alcohol dehydrogenase, putative | O.I. | H.G. | S.X. | |
| 0.27 | 24.6 | 0.98 | Zm.2383.1.A1_at | BG842498 | hypothetical protein LOC100275670 | - | 5e+0 | At2g13820 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | O.I. | H.G. | S.X. | |
| 0.25 | 21.3 | 0.98 | Zm.4271.2.A1_at | AY103821.1 | Isoflavone reductase-like1 | - | 2e-20 | At3g06720 | IMPA-1 (IMPORTIN ALPHA ISOFORM 1) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 12.8 | 98.7 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.2 | 98.6 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.1 | 98.5 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.2 | 97.8 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.7 | 97.6 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.9 | 97.3 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.6 | 97.1 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.5 | 97.1 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.3 | 96.9 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.0 | 90.2 | GSM202298 | B73 immature ear tissue, biological replicate 2 | GSE8176 | Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 86.1 | Gma.2150.1.S1_at | At1g47260 | - | - | 3e-21 | At1g19580 | GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1) | O.I. | H.G. | S.X. | |
| 0.77 | 90.3 | Gma.6437.1.S1_at | At1g47260 | - | - | 1e-25 | At5g52840 | NADH-ubiquinone oxidoreductase-related | O.I. | H.G. | S.X. | |
| 0.67 | 86.1 | Gma.2917.1.S1_at | At1g47260 | - | - | 4e-7 | At2g42210 | mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | O.I. | H.G. | S.X. | |
| 0.50 | 71.7 | GmaAffx.72806.1.S1_at | At1g47260 | - | - | 2e+0 | At5g47360 | pentatricopeptide (PPR) repeat-containing protein | O.I. | H.G. | S.X. | |
| 0.40 | 57.1 | Gma.16923.1.A1_s_at | At1g47260 | - | - | 5e-5 | At2g46505 | SDH4 | O.I. | H.G. | S.X. | |
| 0.40 | 57.1 | Gma.8354.1.S1_s_at | At1g47260 | - | - | 4e-22 | At3g03070 | NADH-ubiquinone oxidoreductase-related | O.I. | H.G. | S.X. | |
| 0.36 | 50.8 | Gma.6439.1.S1_at | At1g47260 | - | - | 7e-34 | At3g53580 | diaminopimelate epimerase family protein | O.I. | H.G. | S.X. | |
| 0.25 | 32.6 | Gma.4111.1.S1_at | At1g47260 | - | - | 6e-82 | At3g08580 | AAC1 (ADP/ATP CARRIER 1) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Hordeum_vulgare |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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