Co-expression analysis

Gene ID Zm.5230.1.A1_at
Gene name acyl-desaturase
Homology with ArabidopsisSimilar to At2g43710: SSI2 (HF=2e-17)
Module size 8 genes
NF 0.61
%ile 81.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4149.70.99Zm.5230.1.A1_atCA404914acyl-desaturase-2e-17At2g43710SSI2O.I.H.G.S.X.
0.8294.60.99Zm.16316.1.A1_atCF244157ATP binding protein-2e-1At5g19210DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.7892.50.98ZmAffx.525.1.A1_atAI711680--8e-1At5g23170protein kinase family proteinO.I.H.G.S.X.
0.6785.80.99ZmAffx.1017.1.A1_atAI881523Hypothetical protein LOC100193713-3e+0At3g25030zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6785.80.99Zm.18038.1.S1_atCD219308--2e+1At5g66700HB53O.I.H.G.S.X.
0.5369.10.99Zm.1134.1.A1_atAY112160.1hypothetical protein LOC100193278-3e+0At2g26940zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.4658.40.99Zm.5070.1.A1_atAY108736.1hypothetical protein LOC100193023-2e-16At1g22950iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsO.I.H.G.S.X.
0.4658.40.99Zm.11338.1.A1_atBM349130hypothetical protein LOC100274516-3e-6At2g40190glycosyl transferase family 1 proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.098.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.090.2GSM206303Upper pulvinus 30 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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