Co-expression analysis

Gene ID	Zm.5225.1.A1_at
Gene name	hypothetical protein LOC100273591
Homology with Arabidopsis	Similar to At5g48740: leucine-rich repeat family protein / protein kinase family protein (HF=4e-2)
Module size	6 genes
NF	0.53
%ile	68.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.1	0.97	Zm.5225.1.A1_at	AI615012	hypothetical protein LOC100273591	-	4e-2	At5g48740	leucine-rich repeat family protein / protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.77	92.1	0.97	Zm.5600.2.A1_a_at	BM333382	thioredoxin H-type 5	-	2e+0	At1g19050	ARR7 (RESPONSE REGULATOR 7)	O.I.	H.G.	S.X.	Please select
0.71	88.2	0.97	Zm.15607.1.S1_at	CA399646	-	-	3e-1	At4g21902	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.97	Zm.10459.1.S1_at	BQ577894	hypothetical protein LOC100276110	-	2e+0	At5g16460	-	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.97	Zm.13827.1.S1_at	CF014663	-	-	2e-9	At5g11380	DXPS3 (1-deoxy-D-xylulose 5-phosphate synthase 3)	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.97	Zm.4775.1.A1_at	CK826898	-	-	1e-1	At2g36695	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.4	98.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.9	98.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.3	98.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.8	98.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.7	98.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.0	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4	98.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.2	97.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.1	97.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.7	95.4	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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