Co-expression analysis

Gene ID Zm.5181.2.A1_a_at
Gene name CK2 protein kinase alpha 2
Homology with ArabidopsisSimilar to At5g67380: CKA1 (CASEIN KINASE ALPHA 1) (HF=2e-34)
Module size 14 genes
NF 0.46
%ile 57.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6582.10.96Zm.5181.2.A1_a_atAI967144CK2 protein kinase alpha 2-2e-34At5g67380CKA1 (CASEIN KINASE ALPHA 1)O.I.H.G.S.X.
0.6481.70.97Zm.17499.1.A1_atCK145371hypothetical protein LOC100279269-3e-1At2g03230-O.I.H.G.S.X.
0.6481.70.97Zm.4540.1.S1_atAY107181.1hypothetical protein LOC100280182-8e-1At1g11650RNA-binding protein 45 (RBP45), putativeO.I.H.G.S.X.
0.5571.60.97Zm.15850.1.S1_atBM381062metallothionein-like protein type 2-4e-7At3g09390MT2A (METALLOTHIONEIN 2A)O.I.H.G.S.X.
0.5571.60.98Zm.4883.1.A1_atAY107709.1Hypothetical protein LOC100216906-2e-5At1g07530SCL14 (SCARECROW-LIKE 14)O.I.H.G.S.X.
0.4658.40.97Zm.10227.2.A1_a_atBM333223--9e-3At5g63370protein kinase family proteinO.I.H.G.S.X.
0.4352.80.97Zm.9560.1.A1_atBM382073m17 protein-3e-2At1g77080-O.I.H.G.S.X.
0.4251.30.98Zm.6453.1.S1_atAY106427.1--3e-1At5g33390glycine-rich proteinO.I.H.G.S.X.
0.4149.70.97Zm.9888.2.A1_a_atBM334632--5e+0At4g16510YbaK/prolyl-tRNA synthetase-relatedO.I.H.G.S.X.
0.4048.50.98Zm.18045.1.A1_atBM080270--8e-4At1g22180SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.H.G.S.X.
0.3742.30.97Zm.14136.1.A1_atAY104147.1hypothetical protein LOC100193727-1e-21At1g27340F-box family proteinO.I.H.G.S.X.
0.3233.40.97Zm.4126.1.A1_atAY112344.1small nucleolar ribonucleoprotein complex subunit-1e+0At3g50440MES10 (METHYL ESTERASE 10)O.I.H.G.S.X.
0.3131.60.97Zm.16892.3.S1_x_atCB281906calmodulin binding protein-5e-3At3g22190IQD5 (IQ-domain 5)O.I.H.G.S.X.
0.3029.80.97Zm.9661.1.A1_atBM335503--4e+0At5g04470SIM (SIAMESE)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.898.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM206325Upper pulvinus 5 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.795.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM206301Upper pulvinus 5 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.294.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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