Co-expression analysis

Gene ID Zm.5122.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g15200: 40S ribosomal protein S9 (RPS9B) (HF=4e+0)
Module size 11 genes
NF 0.56
%ile 74.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7490.30.99Zm.5122.1.A1_atAY103900.1--4e+0At5g1520040S ribosomal protein S9 (RPS9B)O.I.H.G.S.X.
0.7389.90.99ZmAffx.1427.1.S1_at11990232-12--5e-170Atcg00190-O.I.H.G.S.X.
0.6179.50.99Zm.9636.1.A1_atBM349325--2e+1At5g6751060S ribosomal protein L26 (RPL26B)O.I.H.G.S.X.
0.6179.50.99ZmAffx.1464.1.S1_at11990232-31PsaI-2e-23Atcg00510-O.I.H.G.S.X.
0.6179.50.99ZmAffx.140.1.S1_atAI667779--8e-1At2g26170CYP711A1O.I.H.G.S.X.
0.5775.10.99ZmAffx.139.1.A1_atAI667769--1e+1At2g24200cytosol aminopeptidaseO.I.H.G.S.X.
0.5674.40.99ZmAffx.140.1.A1_atAI667779--8e-1At2g26170CYP711A1O.I.H.G.S.X.
0.5674.40.99Zm.8793.1.A1_atCD436545--3e+0At5g11770NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrialO.I.H.G.S.X.
0.5571.60.99Zm.11630.1.A1_atBM379429--4e+0At4g13570HTA4O.I.H.G.S.X.
0.3641.30.99ZmAffx.146.1.S1_atAI667826--2e-1At4g21450vesicle-associated membrane family protein / VAMP family proteinO.I.H.G.S.X.
0.3336.00.99Zm.3608.1.A1_atBG842128protein lap1-6e-4At3g11330leucine-rich repeat family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.599.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.299.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.499.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.498.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM202303Mo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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