Co-expression analysis

Gene ID Zm.5108.1.A1_at
Gene name xyloglucan endotransglucosylase/hydrolase protein 23
Homology with ArabidopsisSimilar to At5g57550: XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3) (HF=1e-3)
Module size 6 genes
NF 0.25
%ile 21.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.95Zm.5108.1.A1_atAI600869xyloglucan endotransglucosylase/hydrolase protein 23-1e-3At5g57550XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)O.I.H.G.S.X.
0.4048.50.97Zm.7914.1.A1_a_atAY103800.1hypothetical protein LOC100277669-5e-11At3g21175ZML1 (ZIM-LIKE 1)O.I.H.G.S.X.
0.3538.90.97Zm.7023.2.S1_x_atAI734540surfactant protein B containing protein-9e-1At2g27250CLV3 (CLAVATA3)O.I.H.G.S.X.
0.2014.20.97Zm.5530.1.A1_atAI629939hypothetical protein LOC100191845-1e-18At2g14740ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3)O.I.H.G.S.X.
0.169.40.97Zm.1408.1.A1_atCN845023gene trap locus 3-1e-14At3g12300unknown proteinO.I.H.G.S.X.
0.094.00.97Zm.6631.1.A1_atAY108443.1hypothetical protein LOC100191632-1e-2At5g11100SYTDO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.698.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.997.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
4.996.7GSM385710Deep-sowing 10d treatment TIBA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
4.796.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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