Co-expression analysis

Gene ID	Zm.5074.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g62600: ATERDJ3B (HF=5e-14)
Module size	7 genes
NF	0.72
%ile	93.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.98	Zm.5074.1.A1_at	AI600716	-	-	5e-14	At3g62600	ATERDJ3B	O.I.	H.G.	S.X.	Please select
0.77	92.1	0.98	Zm.17781.1.A1_at	CK370654	-	-	1e+1	At1g69530	ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)	O.I.	H.G.	S.X.	Please select
0.75	90.8	0.98	Zm.94.1.S1_at	X79934.1	Dof2	-	1e-7	At2g28810	Dof-type zinc finger domain-containing protein	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.98	Zm.11672.1.A1_at	BM379851	-	-	5e+0	At5g36910	THI2.2 (THIONIN 2.2)	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.99			-	-				O.I.	H.G.	S.X.	Please select
0.59	76.1	0.99	Zm.4833.1.A1_at	CF003111	hypothetical protein LOC100272303	-	2e-12	At5g57815	cytochrome c oxidase subunit 6b, putative	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.98	Zm.5890.1.A1_at	AI664901	-	-	3e+0	At1g24010	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.3	99.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.2	98.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.6	98.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.2	98.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.9	97.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.9	97.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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