Co-expression analysis

Gene ID	Zm.5017.1.S1_at
Gene name	dynamin-related protein 1C
Homology with Arabidopsis	Similar to At1g14830: ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C) (HF=5e-46)
Module size	7 genes
NF	0.67
%ile	89.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	55.7	0.93	Zm.5017.1.S1_at	BM072931	dynamin-related protein 1C	-	5e-46	At1g14830	ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C)	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.95	Zm.6381.1.A1_at	CO534945	hypothetical protein LOC100273528	-	2e+0	At2g42610	LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.95	Zm.1783.1.S1_at	AY109631.1	protein binding protein	-	1e+1	At5g24860	FPF1 (FLOWERING PROMOTING FACTOR 1)	O.I.	H.G.	S.X.	Please select
0.71	88.2	0.92	Zm.16513.4.S1_at	AY104628.1	actin-7	-	0	At5g09810	ACT7 (ACTIN 7)	O.I.	H.G.	S.X.	Please select
0.71	88.2	0.94	Zm.4336.1.S1_at	CA403908	hypothetical protein LOC100274309	-	4e+0	At5g38580	-	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.95	Zm.6874.2.S1_at	CF637577	-	-	3e-3	At2g45430	DNA-binding protein-related	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.95	Zm.6872.1.A1_at	AI065521	-	-	2e+0	At1g27920	MAP65-8 (MICROTUBULE-ASSOCIATED PROTEIN 65-8)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.8	98.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.6	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.5	98.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9	98.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.5	97.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.8	95.5	GSM253252	ZM_24h_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

A co-expression module including the wheat gene, Ta.307.1.S1_at, orthologous to the query gene, Zm.5017.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.0	Ta.307.1.S1_at	At1g14830	-	-	2e-42	At1g14830	ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C)	O.I.	H.G.	S.X.	Please select
0.77	90.8	Ta.14440.1.S1_at	At1g14830	-	-	9e-16	At1g30630	coatomer protein epsilon subunit family protein / COPE family protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	Ta.14529.3.A1_x_at	At1g14830	-	-	1e+0	At1g29070	ribosomal protein L34 family protein	O.I.	H.G.	S.X.	Please select
0.19	22.4	Ta.14557.1.S1_at	At1g14830	20S proteasome beta 4 subunit	-	1e-7	At4g14800	PBD2 (20S PROTEASOME BETA SUBUNIT 2)	O.I.	H.G.	S.X.	Please select
0.15	17.1	TaAffx.31807.1.S1_x_at	At1g14830	-	-	9e+0	At3g04120	GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)	O.I.	H.G.	S.X.	Please select
0.14	15.8	Ta.14551.1.S1_at	At1g14830	-	-	5e-1	At1g65710	unknown protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

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