Co-expression analysis

Gene ID	Zm.496.1.S1_at
Gene name	prohibitin3
Homology with Arabidopsis	Similar to At5g40770: ATPHB3 (PROHIBITIN 3) (HF=7e-7)
Module size	8 genes
NF	0.60
%ile	80.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.58	75.1	0.98	Zm.496.1.S1_at	AF236370.1	prohibitin3	-	7e-7	At5g40770	ATPHB3 (PROHIBITIN 3)	O.I.	H.G.	S.X.	Please select
0.75	90.8	0.98	Zm.12836.1.S1_at	CA400077	MPPN domain containing protein	-	2e+0	At2g21220	auxin-responsive protein, putative	O.I.	H.G.	S.X.	Please select
0.71	88.2	0.98	Zm.17636.1.A1_at	CK368463	-	-	1e+0	At5g34882	-	O.I.	H.G.	S.X.	Please select
0.56	74.4	0.98	Zm.16536.1.A1_at	AY103592.1	spermidine synthase 1	-	1e-17	At1g23820	SPDS1 (spermidine synthase 1)	O.I.	H.G.	S.X.	Please select
0.52	67.3	0.98	Zm.7152.1.A1_at	AY110483.1	hypothetical protein LOC100216962	-	7e-5	At5g47500	pectinesterase family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.4024.1.A1_at	AY105692.1	-	-	1e-3	At2g35170	MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.5018.3.A1_at	AI668145	-	-	9e-1	At5g48920	TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.99	Zm.16538.1.S1_at	BM337996	-	-	7e-15	At1g15520	PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.3	98.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.6	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.4	98.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.0	98.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4	98.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9	97.7	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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