Co-expression analysis

Gene ID	Zm.4898.1.S1_at
Gene name	hypothetical protein LOC100279412
Homology with Arabidopsis	Similar to At4g16143: IMPA-2 (IMPORTIN ALPHA ISOFORM 2) (HF=6e-25)
Module size	9 genes
NF	0.46
%ile	56.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	76.1	0.97	Zm.4898.1.S1_at	BI417088	hypothetical protein LOC100279412	-	6e-25	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.98	Zm.19266.1.A1_at	CO521373	-	-	2e+1	At5g20570	RBX1 (RING-BOX 1)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.6054.1.A1_at	AW497492	-	-	3e+0	At5g25490	zinc finger (Ran-binding) family protein	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.98	Zm.5517.1.A1_at	BE051194	hypothetical protein LOC100273563	-	2e-1	At1g15740	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select
0.45	56.4	0.97	Zm.5106.1.A1_at	AI600864	hypothetical protein LOC100273412	-	1e-20	At4g22330	ATCES1	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.98	Zm.796.1.A1_a_at	CK370719	-	-	3e-9	At5g53140	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.98	Zm.1079.4.S1_at	AY109373.1	-	-	2e-2	At5g14740	CA2 (CARBONIC ANHYDRASE 2)	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.98	Zm.14400.1.S1_at	AW000473	hypothetical protein LOC100191706	-	8e-52	At4g02720	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.98	Zm.5712.1.A1_at	AI637069	-	-	1e+1	At5g19875	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.2	99.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.5	99.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.0	98.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.0	94.0	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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