Co-expression analysis

Gene ID Zm.4893.1.A1_at
Gene name hypothetical protein LOC100276864
Homology with ArabidopsisSimilar to At5g11600: unknown protein (HF=2e-7)
Module size 37 genes
NF 0.60
%ile 79.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8796.40.93Zm.4893.1.A1_atAW067307hypothetical protein LOC100276864-2e-7At5g11600unknown proteinO.I.H.G.S.X.
0.8294.60.96Zm.5917.1.A1_a_atBM337345hypothetical protein LOC100192679-2e+0At1g27970NTF2B (NUCLEAR TRANSPORT FACTOR 2B)O.I.H.G.S.X.
0.7992.80.97Zm.16482.2.A1_atBM337760--9e-19At3g0963060S ribosomal protein L4/L1 (RPL4A)O.I.H.G.S.X.
0.7792.10.96Zm.5441.1.S1_atCO528962hypothetical protein LOC100274317-3e+0At3g23130SUP (SUPERMAN)O.I.H.G.S.X.
0.7389.90.96Zm.5220.1.S1_atAI614989hypothetical protein LOC100279470-1e+0At5g36120CCB3 (COFACTOR ASSEMBLY, COMPLEX C (B6F),)O.I.H.G.S.X.
0.7087.00.96Zm.18590.1.A1_atAW562614exostosin-like-1e+0At5g22930unknown proteinO.I.H.G.S.X.
0.7087.00.95Zm.3484.1.A1_atAW438127hypothetical protein LOC100273241-2e+0At1g67700unknown proteinO.I.H.G.S.X.
0.6986.50.95Zm.4561.2.A1_x_atCO532693--6e+0At5g65520bindingO.I.H.G.S.X.
0.6886.10.95Zm.12819.1.S1_atCF6356153-isopropylmalate dehydratase small subunit 2-1e-1At3g58990aconitase C-terminal domain-containing proteinO.I.H.G.S.X.
0.6481.70.95Zm.6011.1.A1_atAI738205hypothetical protein LOC100280191-2e-10At1g34420leucine-rich repeat family protein / protein kinase family proteinO.I.H.G.S.X.
0.6481.70.95Zm.18388.1.A1_atCB604567hypothetical protein LOC100273514-1e-1At3g46620zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6481.70.95ZmAffx.240.1.S1_atAI670252--3e+0At5g11610exostosin family proteinO.I.H.G.S.X.
0.6381.10.95Zm.12968.1.S1_atCO528187pyruvate dehydrogenase E1 component subunit beta-3e-62At1g30120PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA)O.I.H.G.S.X.
0.6279.80.96ZmAffx.1097.1.S1_atAW120085--1e+1At5g25770unknown proteinO.I.H.G.S.X.
0.6279.80.96Zm.4667.1.A1_atBG266366hypothetical protein LOC100274574-4e-1At1g32780alcohol dehydrogenase, putativeO.I.H.G.S.X.
0.6179.50.96Zm.15852.2.S1_a_atAY108720.1--1e-41At5g03430phosphoadenosine phosphosulfate (PAPS) reductase family proteinO.I.H.G.S.X.
0.6179.50.95Zm.828.1.A1_atAI734461hypothetical protein LOC100277560-5e+0At3g21371unknown proteinO.I.H.G.S.X.
0.6179.50.96Zm.10315.1.S1_atAF461732.1uncoupling protein-6e-5At5g58970ATUCP2 (UNCOUPLING PROTEIN 2)O.I.H.G.S.X.
0.6077.80.96Zm.4462.1.A1_atAI714968--1e+1At4g00342unknown proteinO.I.H.G.S.X.
0.5875.10.95Zm.2967.1.A1_atAW119983--1e+0At1g30110ATNUDX25 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 25)O.I.H.G.S.X.
0.5775.10.96Zm.4043.1.S1_atAW091252--3e-10At1g59750ARF1 (AUXIN RESPONSE FACTOR 1)O.I.H.G.S.X.
0.5775.10.96Zm.5388.1.S1_atAW453245hypothetical protein LOC100193632-6e-23At3g09180unknown proteinO.I.H.G.S.X.
0.5674.40.95Zm.1546.3.A1_x_atCK369824--1e-6At1g15270-O.I.H.G.S.X.
0.5571.60.95Zm.18466.1.A1_atCO532706hypothetical protein LOC100279872-2e+0At5g51050mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.5469.80.95Zm.18903.1.A1_atCO530915--7e-2At5g07400forkhead-associated domain-containing protein / FHA domain-containing proteinO.I.H.G.S.X.
0.5369.10.93Zm.9792.1.A1_atBM338998pleckstrin homology domain-containing protein 1-7e-3At5g05710pleckstrin homology (PH) domain-containing proteinO.I.H.G.S.X.
0.5166.40.93Zm.54.1.S1_atL25805.1alpha-amylase-3e-3At4g25000AMY1 (ALPHA-AMYLASE-LIKE)O.I.H.G.S.X.
0.5166.40.95Zm.5796.1.A1_atBM332299--3e-41At1g62750SCO1 (SNOWY COTYLEDON 1)O.I.H.G.S.X.
0.5166.40.93Zm.5567.1.A1_atBE552517Histone H2B.2-6e-1At1g07000ATEXO70B2 (exocyst subunit EXO70 family protein B2)O.I.H.G.S.X.
0.4961.90.95Zm.16958.1.A1_a_atAI665328hypothetical protein LOC100193269-6e-4At5g1613040S ribosomal protein S7 (RPS7C)O.I.H.G.S.X.
0.4861.30.95Zm.12132.3.S1_a_atAI461523hypothetical protein LOC100192680-4e-50At5g03240UBQ3 (POLYUBIQUITIN 3)O.I.H.G.S.X.
0.4759.90.95Zm.6507.1.S1_atCO525968hypothetical protein LOC100191970-2e-8At2g46210delta-8 sphingolipid desaturase, putativeO.I.H.G.S.X.
0.4658.40.95Zm.4099.2.A1_s_atAI770849hypothetical protein LOC100191159-8e-1At2g38870protease inhibitor, putativeO.I.H.G.S.X.
0.4658.40.96Zm.12704.2.A1_atBM080159--4e-21At5g09900EMB2107 (EMBRYO DEFECTIVE 2107)O.I.H.G.S.X.
0.4658.40.95ZmAffx.845.1.A1_atAI770615--3e-2At3g50980XERO1 (DEHYDRIN XERO 1)O.I.H.G.S.X.
0.4352.80.97Zm.6418.1.S1_atAY108322.1hypothetical protein LOC100216693-2e-1At3g44580unknown proteinO.I.H.G.S.X.
0.4048.50.95Zm.1674.1.S1_atAY106902.1hypothetical protein LOC100217253-9e-10At1g30470SIT4 phosphatase-associated family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.398.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.090.2GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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