Co-expression analysis

Gene ID	Zm.4882.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g62920: unknown protein (HF=9e+0)
Module size	6 genes
NF	0.68
%ile	90.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.98	Zm.4882.2.S1_at	CK985806	-	-	9e+0	At3g62920	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.6367.1.S1_at	BM259420	-	-	3e-1	At4g26200	ACS7	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.14071.1.A1_at	AY109092.1	hypothetical protein LOC100279213	-	2e-16	At5g19330	armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.97	Zm.2176.1.S1_at	AY111425.1	-	-	4e+0	At1g54215	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.56	74.4	0.97	Zm.6139.2.A1_at	CF018619	methionyl-tRNA synthetase	-	1e-5	At2g40660	tRNA-binding region domain-containing protein	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.97	Zm.6467.1.A1_at	AI692044	-	-	2e+0	At5g59470	PQ-loop repeat family protein / transmembrane family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
17.8	99.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.1	99.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.4	99.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0	98.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3	98.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.4	97.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.0	95.8	GSM320445	protocol: mRNA - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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