Co-expression analysis

Gene ID Zm.4863.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g38465: unknown protein (HF=2e-1)
Module size 14 genes
NF 0.62
%ile 83.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.99Zm.4863.1.S1_atAW600383--2e-1At2g38465unknown proteinO.I.H.G.S.X.
0.7389.90.99Zm.606.1.A2_s_atAF326493.1plasma membrane integral protein ZmPIP2-2 /// plasma membrane intrinsic protein2-1e-37At2g37180RD28 (RESPONSIVE TO DESICCATION 28)O.I.H.G.S.X.
0.7188.20.99Zm.7090.1.S1_atAY105718.1hypothetical protein LOC100191899-6e+0At5g01740-O.I.H.G.S.X.
0.6886.10.99Zm.5823.1.A1_atCO520297hypothetical protein LOC100194104-2e-10At1g14310haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.6785.80.99Zm.2949.1.A1_atCK144458nucleic acid binding protein-3e-6At2g38610KH domain-containing proteinO.I.H.G.S.X.
0.6279.80.99Zm.4866.1.S1_atAY103887.120S proteasome alpha 4 subunit-5e-26At3g51260PAD1 (20s proteasome alpha subunit pad1)O.I.H.G.S.X.
0.5875.10.99Zm.17000.1.A1_s_atCF626261hypothetical protein LOC100273843 /// 60S ribosomal protein L10-3-8e-2At2g46620AAA-type ATPase family proteinO.I.H.G.S.X.
0.5875.10.99Zm.7091.1.A1_x_atU23190.1chlorophyll a/b-binding apoprotein CP24 precursor-3e-15At1g15820LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6)O.I.H.G.S.X.
0.5775.10.99Zm.709.1.A1_atAY108614.1ATP synthase B chain-3e-8At4g32260ATP synthase familyO.I.H.G.S.X.
0.5775.10.99Zm.6061.1.S1_atAY109202.1hypothetical protein LOC100192928-2e-46At5g20570RBX1 (RING-BOX 1)O.I.H.G.S.X.
0.5369.10.99Zm.16698.1.A1_s_atBM337580--5e+0At1g14755-O.I.H.G.S.X.
0.5267.30.99Zm.16532.4.S1_x_atBI42368260S ribosomal protein L18a-7e-68At2g3448060S ribosomal protein L18A (RPL18aB)O.I.H.G.S.X.
0.5267.30.99Zm.5833.1.A1_atCA398697adenylate kinase-1e-2At5g47840AMK2 (Adenosine monophosphate kinase)O.I.H.G.S.X.
0.5166.40.99Zm.1670.1.A1_atAY109012.1--2e-2At1g29380-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.798.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.997.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.097.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM253279ZM_8d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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